RR12_CUCSA
ID RR12_CUCSA Reviewed; 123 AA.
AC Q4VZJ2; A5J1R4; Q2QD65;
DT 06-FEB-2007, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2005, sequence version 1.
DT 25-MAY-2022, entry version 76.
DE RecName: Full=30S ribosomal protein S12, chloroplastic;
GN Name=rps12-A; OrderedLocusNames=CsCp066;
GN and
GN Name=rps12-B;
OS Cucumis sativus (Cucumber).
OG Plastid; Chloroplast.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis.
OX NCBI_TaxID=3659;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Baekmibaekdadagi;
RX PubMed=16362300; DOI=10.1007/s00299-005-0097-y;
RA Kim J.-S., Jung J.D., Lee J.-A., Park H.-W., Oh K.-H., Jeong W.J.,
RA Choi D.-W., Liu J.R., Cho K.Y.;
RT "Complete sequence and organization of the cucumber (Cucumis sativus L. cv.
RT Baekmibaekdadagi) chloroplast genome.";
RL Plant Cell Rep. 25:334-340(2006).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Borszczagowski;
RX PubMed=17607527; DOI=10.2478/s11658-007-0029-7;
RA Plader W.W., Yukawa Y., Sugiura M., Malepszy S.;
RT "The complete structure of the cucumber (Cucumis sativus L.) chloroplast
RT genome: its composition and comparative analysis.";
RL Cell. Mol. Biol. Lett. 12:584-594(2007).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA] OF 1-115.
RC STRAIN=cv. Chipper, and cv. Gy14;
RX PubMed=17546086; DOI=10.1139/g07-003;
RA Chung S.-M., Gordon V.S., Staub J.E.;
RT "Sequencing cucumber (Cucumis sativus L.) chloroplast genomes identifies
RT differences between chilling-tolerant and -susceptible cucumber lines.";
RL Genome 50:215-225(2007).
CC -!- FUNCTION: With S4 and S5 plays an important role in translational
CC accuracy. Located at the interface of the 30S and 50S subunits (By
CC similarity). {ECO:0000250}.
CC -!- SUBUNIT: Part of the 30S ribosomal subunit. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uS12 family.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAZ94707.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=ABI97472.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=ABI97480.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=ABI98769.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC Sequence=ABI98803.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; DQ119058; AAZ94707.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AJ970307; CAJ00782.1; -; Genomic_DNA.
DR EMBL; AJ970307; CAJ00783.1; -; Genomic_DNA.
DR EMBL; DQ865975; ABI97472.1; ALT_SEQ; Genomic_DNA.
DR EMBL; DQ865975; ABI97480.1; ALT_SEQ; Genomic_DNA.
DR EMBL; DQ865976; ABI98769.1; ALT_SEQ; Genomic_DNA.
DR EMBL; DQ865976; ABI98803.1; ALT_SEQ; Genomic_DNA.
DR RefSeq; YP_247623.1; NC_007144.1.
DR RefSeq; YP_247624.1; NC_007144.1.
DR AlphaFoldDB; Q4VZJ2; -.
DR SMR; Q4VZJ2; -.
DR STRING; 3659.XP_004154212.1; -.
DR GeneID; 3429306; -.
DR GeneID; 3429307; -.
DR KEGG; csv:3429306; -.
DR KEGG; csv:3429307; -.
DR eggNOG; KOG1750; Eukaryota.
DR GO; GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
DR GO; GO:0015935; C:small ribosomal subunit; IEA:InterPro.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR CDD; cd03368; Ribosomal_S12; 1.
DR Gene3D; 2.40.50.140; -; 1.
DR HAMAP; MF_00403_B; Ribosomal_S12_B; 1.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR006032; Ribosomal_S12/S23.
DR InterPro; IPR005679; Ribosomal_S12_bac.
DR PANTHER; PTHR11652; PTHR11652; 1.
DR Pfam; PF00164; Ribosom_S12_S23; 1.
DR PIRSF; PIRSF002133; Ribosomal_S12/S23; 1.
DR PRINTS; PR01034; RIBOSOMALS12.
DR SUPFAM; SSF50249; SSF50249; 1.
DR TIGRFAMs; TIGR00981; rpsL_bact; 1.
DR PROSITE; PS00055; RIBOSOMAL_S12; 1.
PE 3: Inferred from homology;
KW Chloroplast; Plastid; Ribonucleoprotein; Ribosomal protein; RNA-binding;
KW rRNA-binding.
FT CHAIN 1..123
FT /note="30S ribosomal protein S12, chloroplastic"
FT /id="PRO_0000276608"
SQ SEQUENCE 123 AA; 13764 MW; E15ADC4952508F57 CRC64;
MPTIKQLIRN TRQPIRNVTK SPALRGCPQR RGTCTRVYTI TPKKPNSALR KVARVRLTSG
FEITAYIPGI GHNLQEHSVV LVRGGRVKDL PGVRYHIVRG TLDAVGVKDR QQGRSKYGVK
KPK
