RR18_ORYSJ
ID RR18_ORYSJ Reviewed; 163 AA.
AC P0C477; P12152; Q6QXZ6; Q6QY60;
DT 12-JUN-2007, integrated into UniProtKB/Swiss-Prot.
DT 12-JUN-2007, sequence version 1.
DT 03-AUG-2022, entry version 81.
DE RecName: Full=30S ribosomal protein S18, chloroplastic;
GN Name=rps18; OrderedLocusNames=LOC_Osp1g00570; ORFNames=Nip088;
OS Oryza sativa subsp. japonica (Rice).
OG Plastid; Chloroplast.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=2770692; DOI=10.1007/bf02464880;
RA Hiratsuka J., Shimada H., Whittier R., Ishibashi T., Sakamoto M., Mori M.,
RA Kondo C., Honji Y., Sun C.-R., Meng B.-Y., Li Y.-Q., Kanno A.,
RA Nishizawa Y., Hirai A., Shinozaki K., Sugiura M.;
RT "The complete sequence of the rice (Oryza sativa) chloroplast genome:
RT intermolecular recombination between distinct tRNA genes accounts for a
RT major plastid DNA inversion during the evolution of the cereals.";
RL Mol. Gen. Genet. 217:185-194(1989).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15122023; DOI=10.1104/pp.103.031245;
RA Tang J., Xia H., Cao M., Zhang X., Zeng W., Hu S., Tong W., Wang J.,
RA Wang J., Yu J., Yang H., Zhu L.;
RT "A comparison of rice chloroplast genomes.";
RL Plant Physiol. 135:412-420(2004).
CC -!- SUBUNIT: Part of the 30S ribosomal subunit.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast.
CC -!- SIMILARITY: Belongs to the bacterial ribosomal protein bS18 family.
CC {ECO:0000305}.
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DR EMBL; X15901; CAA33970.1; -; Genomic_DNA.
DR EMBL; AY522330; AAS46135.1; -; Genomic_DNA.
DR PIR; JQ0248; R3RZ18.
DR RefSeq; NP_039408.1; NC_001320.1.
DR AlphaFoldDB; P0C477; -.
DR SMR; P0C477; -.
DR BioGRID; 792808; 1.
DR STRING; 4530.OS01T0523401-00; -.
DR PaxDb; P0C477; -.
DR PRIDE; P0C477; -.
DR GeneID; 3131440; -.
DR KEGG; osa:3131440; -.
DR eggNOG; KOG3162; Eukaryota.
DR HOGENOM; CLU_134048_0_0_1; -.
DR InParanoid; P0C477; -.
DR OrthoDB; 1473182at2759; -.
DR Proteomes; UP000059680; Chloroplast.
DR Genevisible; P0C477; OS.
DR GO; GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
DR GO; GO:0005763; C:mitochondrial small ribosomal subunit; IBA:GO_Central.
DR GO; GO:0009536; C:plastid; IC:Gramene.
DR GO; GO:0070181; F:small ribosomal subunit rRNA binding; IBA:GO_Central.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR Gene3D; 4.10.640.10; -; 1.
DR HAMAP; MF_00270; Ribosomal_S18; 1.
DR InterPro; IPR001648; Ribosomal_S18.
DR InterPro; IPR018275; Ribosomal_S18_CS.
DR InterPro; IPR036870; Ribosomal_S18_sf.
DR PANTHER; PTHR13479; PTHR13479; 1.
DR Pfam; PF01084; Ribosomal_S18; 1.
DR PRINTS; PR00974; RIBOSOMALS18.
DR SUPFAM; SSF46911; SSF46911; 1.
DR TIGRFAMs; TIGR00165; S18; 1.
DR PROSITE; PS00057; RIBOSOMAL_S18; 1.
PE 3: Inferred from homology;
KW Chloroplast; Plastid; Reference proteome; Repeat; Ribonucleoprotein;
KW Ribosomal protein; RNA-binding; rRNA-binding.
FT CHAIN 1..163
FT /note="30S ribosomal protein S18, chloroplastic"
FT /id="PRO_0000290076"
FT REPEAT 4..10
FT REPEAT 11..17
FT REPEAT 18..24
FT REPEAT 25..31
FT REPEAT 32..38
FT REPEAT 39..45
FT REGION 1..54
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 4..52
FT /note="6 X 7 AA tandem repeats"
FT REGION 121..163
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 10..45
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 134..163
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 155
FT /note="N -> T (in Ref. 1; CAA33970)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 163 AA; 19656 MW; 65285CB42C125DE5 CRC64;
MYTSKQPFHK SKQTFHKSKQ TFRKSKQTFR KFKQPFRKPK QPFRRRPRIG PGDRIDYRNM
SLINRFISEQ GKILSRRINR LTLKQQRLIT LAIKQARILS FLPFRNYENE KQFQAQSISI
ITGPRPRKNR HIPPLTQKFN SNRNLRNSNQ TLRNNNRNLS SDC
