RR2A_CHLRE
ID RR2A_CHLRE Reviewed; 570 AA.
AC O47027; B7U1H6;
DT 11-JUL-2003, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-1998, sequence version 1.
DT 03-AUG-2022, entry version 103.
DE RecName: Full=30S ribosomal protein S2, chloroplastic;
GN Name=rps2-1;
OS Chlamydomonas reinhardtii (Chlamydomonas smithii).
OG Plastid; Chloroplast.
OC Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Chlorophyceae;
OC CS clade; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas.
OX NCBI_TaxID=3055;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=9711304; DOI=10.1016/s0005-2728(98)00107-8;
RA Leu S.;
RT "Extraordinary features in the Chlamydomonas reinhardtii chloroplast
RT genome: (1) rps2 as part of a large open reading frame; (2) a C.
RT reinhardtii specific repeat sequence.";
RL Biochim. Biophys. Acta 1365:541-544(1998).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CC-503;
RX PubMed=19473533; DOI=10.1186/1471-2148-9-120;
RA Smith D.R., Lee R.W.;
RT "Nucleotide diversity of the Chlamydomonas reinhardtii plastid genome:
RT addressing the mutational-hazard hypothesis.";
RL BMC Evol. Biol. 9:120-120(2009).
RN [3]
RP PROTEIN SEQUENCE OF 118-137; 160-173; 174-187; 279-295; 398-411 AND
RP 538-549.
RC STRAIN=Arg7/cw15;
RX PubMed=12417713; DOI=10.1105/tpc.004341;
RA Yamaguchi K., Prieto S., Beligni M.V., Haynes P.A., McDonald W.H.,
RA Yates J.R. III, Mayfield S.P.;
RT "Proteomic characterization of the small subunit of Chlamydomonas
RT reinhardtii chloroplast ribosome: identification of a novel S1 domain-
RT containing protein and unusually large orthologs of bacterial S2, S3, and
RT S5.";
RL Plant Cell 14:2957-2974(2002).
RN [4]
RP IDENTIFICATION, AND COMPLETE PLASTID GENOME.
RX PubMed=12417694; DOI=10.1105/tpc.006155;
RA Maul J.E., Lilly J.W., Cui L., dePamphilis C.W., Miller W., Harris E.H.,
RA Stern D.B.;
RT "The Chlamydomonas reinhardtii plastid chromosome: islands of genes in a
RT sea of repeats.";
RL Plant Cell 14:2659-2679(2002).
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uS2 family.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=ACJ50123.1; Type=Erroneous termination; Note=Extended C-terminus.; Evidence={ECO:0000305};
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DR EMBL; Y16473; CAA76245.1; -; Genomic_DNA.
DR EMBL; FJ423446; ACJ50123.1; ALT_SEQ; Genomic_DNA.
DR EMBL; BK000554; DAA00936.1; -; Genomic_DNA.
DR PIR; T07993; T07993.
DR RefSeq; NP_958391.1; NC_005353.1.
DR AlphaFoldDB; O47027; -.
DR SMR; O47027; -.
DR STRING; 3055.DAA00936; -.
DR PaxDb; O47027; -.
DR PRIDE; O47027; -.
DR GeneID; 2717006; -.
DR KEGG; cre:ChreCp035; -.
DR eggNOG; KOG0832; Eukaryota.
DR HOGENOM; CLU_478486_0_0_1; -.
DR OrthoDB; 573006at2759; -.
DR Proteomes; UP000006906; Chloroplast.
DR GO; GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
DR GO; GO:0005763; C:mitochondrial small ribosomal subunit; IBA:GO_Central.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR CDD; cd01425; RPS2; 1.
DR Gene3D; 2.40.50.140; -; 2.
DR HAMAP; MF_00291_B; Ribosomal_S2_B; 1.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR001865; Ribosomal_S2.
DR InterPro; IPR005706; Ribosomal_S2_bac/mit/plastid.
DR InterPro; IPR023591; Ribosomal_S2_flav_dom_sf.
DR InterPro; IPR002792; TRAM_dom.
DR PANTHER; PTHR12534; PTHR12534; 1.
DR Pfam; PF00318; Ribosomal_S2; 1.
DR Pfam; PF01938; TRAM; 1.
DR SUPFAM; SSF52313; SSF52313; 1.
DR TIGRFAMs; TIGR01011; rpsB_bact; 1.
DR PROSITE; PS50926; TRAM; 2.
PE 1: Evidence at protein level;
KW Chloroplast; Direct protein sequencing; Plastid; Reference proteome;
KW Repeat; Ribonucleoprotein; Ribosomal protein.
FT CHAIN 1..570
FT /note="30S ribosomal protein S2, chloroplastic"
FT /id="PRO_0000134316"
FT DOMAIN 28..89
FT /note="TRAM 1"
FT DOMAIN 104..169
FT /note="TRAM 2"
FT REGION 1..306
FT /note="N-terminal extension"
SQ SEQUENCE 570 AA; 63159 MW; F647A067EDB83B4F CRC64;
MLNKKPPYLI LSLIMIKTQK SKQTAVRKLI PGNVISLKIT AMGANNVGIN EFTFGIPVLV
PNAKLGETVQ AKVLKILASK KIAIAKLIKV VTKTNATETN NLAALTPGAT LDVTITKLGP
NSTGIADLGN NYNNVNKLIV KKSAITIGEK VTVLVTRVKN GYAFGVATVS TQRLNQVSTS
LTQNSFKGTK FTVVLPKNAK RYLKHLVFKV TTATAQNLSV NGFEQTLFKK GAVGLDTRIN
NQNGSAGNLT TVPTNTILFV KPNLGAKLGD KVQIQIIKFA SIENGTLTYN VAIAKIIKLN
PLSTPQKKAF VRSSLRQMLK SGMHYGEKAI KCNARMKNYV WTRKKGTDTK VEARPLIKKG
RNLINLLKTR RCLTKALAQL TKYAAKGKTF LFVGTKKAAS GLVARAALFS KKAFFVNTRW
LGGMLTNWKT ILKSISKIRP ILKEKQMIIK DILEKRQTIK ARLIQKALLL RKKSKLMLKK
GRLLIQMLKQ NNSNSTSGKQ AVRFLFTEKT NLLNTKRKEF VSKGILLLEK RQQLVVKRQE
LITQSQTLKS KAIQLTNTIS QFIKQFNLFT