RR4_ANTAG
ID RR4_ANTAG Reviewed; 202 AA.
AC Q85AX4;
DT 02-FEB-2004, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2003, sequence version 1.
DT 25-MAY-2022, entry version 70.
DE RecName: Full=30S ribosomal protein S4, chloroplastic;
GN Name=rps4;
OS Anthoceros angustus (Hornwort) (Anthoceros formosae).
OG Plastid; Chloroplast.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Anthocerotophyta;
OC Anthocerotopsida; Anthocerotidae; Anthocerotales; Anthocerotaceae;
OC Anthoceros.
OX NCBI_TaxID=48387;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], AND RNA EDITING.
RX PubMed=12527781; DOI=10.1093/nar/gkg155;
RA Kugita M., Kaneko A., Yamamoto Y., Takeya Y., Matsumoto T., Yoshinaga K.;
RT "The complete nucleotide sequence of the hornwort (Anthoceros formosae)
RT chloroplast genome: insight into the earliest land plants.";
RL Nucleic Acids Res. 31:716-721(2003).
RN [2]
RP NUCLEOTIDE SEQUENCE [MRNA], AND RNA EDITING.
RC TISSUE=Thallus;
RX PubMed=12711687; DOI=10.1093/nar/gkg327;
RA Kugita M., Yamamoto Y., Fujikawa T., Matsumoto T., Yoshinaga K.;
RT "RNA editing in hornwort chloroplasts makes more than half the genes
RT functional.";
RL Nucleic Acids Res. 31:2417-2423(2003).
CC -!- FUNCTION: One of the primary rRNA binding proteins, it binds directly
CC to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
CC {ECO:0000250}.
CC -!- FUNCTION: With S5 and S12 plays an important role in translational
CC accuracy. {ECO:0000250}.
CC -!- SUBUNIT: Part of the 30S ribosomal subunit. Contacts protein S5. The
CC interaction surface between S4 and S5 is involved in control of
CC translational fidelity (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast.
CC -!- RNA EDITING: Modified_positions=64 {ECO:0000269|PubMed:12527781,
CC ECO:0000269|PubMed:12711687}, 79 {ECO:0000269|PubMed:12527781,
CC ECO:0000269|PubMed:12711687}, 91 {ECO:0000269|PubMed:12527781,
CC ECO:0000269|PubMed:12711687}, 97 {ECO:0000269|PubMed:12527781,
CC ECO:0000269|PubMed:12711687}, 98 {ECO:0000269|PubMed:12527781,
CC ECO:0000269|PubMed:12711687}, 127 {ECO:0000269|PubMed:12527781,
CC ECO:0000269|PubMed:12711687}, 137 {ECO:0000269|PubMed:12527781,
CC ECO:0000269|PubMed:12711687}, 142 {ECO:0000269|PubMed:12527781,
CC ECO:0000269|PubMed:12711687}; Note=The nonsense codons at positions 64,
CC 97 and 142 are modified to sense codons.;
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uS4 family.
CC {ECO:0000305}.
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DR EMBL; AB086179; BAC55351.1; -; Genomic_DNA.
DR EMBL; AB087443; BAC55444.1; -; mRNA.
DR RefSeq; NP_777415.1; NC_004543.1.
DR AlphaFoldDB; Q85AX4; -.
DR SMR; Q85AX4; -.
DR GeneID; 2553434; -.
DR GO; GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
DR GO; GO:0015935; C:small ribosomal subunit; IEA:InterPro.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR CDD; cd00165; S4; 1.
DR Gene3D; 3.10.290.10; -; 1.
DR HAMAP; MF_01306_B; Ribosomal_S4_B; 1.
DR InterPro; IPR022801; Ribosomal_S4/S9.
DR InterPro; IPR001912; Ribosomal_S4/S9_N.
DR InterPro; IPR005709; Ribosomal_S4_bac-type.
DR InterPro; IPR018079; Ribosomal_S4_CS.
DR InterPro; IPR002942; S4_RNA-bd.
DR InterPro; IPR036986; S4_RNA-bd_sf.
DR PANTHER; PTHR11831; PTHR11831; 1.
DR Pfam; PF00163; Ribosomal_S4; 1.
DR Pfam; PF01479; S4; 1.
DR SMART; SM01390; Ribosomal_S4; 1.
DR SMART; SM00363; S4; 1.
DR TIGRFAMs; TIGR01017; rpsD_bact; 1.
DR PROSITE; PS00632; RIBOSOMAL_S4; 1.
DR PROSITE; PS50889; S4; 1.
PE 2: Evidence at transcript level;
KW Chloroplast; Plastid; Ribonucleoprotein; Ribosomal protein; RNA editing;
KW RNA-binding; rRNA-binding.
FT CHAIN 1..202
FT /note="30S ribosomal protein S4, chloroplastic"
FT /id="PRO_0000132532"
FT DOMAIN 90..158
FT /note="S4 RNA-binding"
SQ SEQUENCE 202 AA; 23577 MW; A5808EEB19C458E4 CRC64;
MSRYRGPRVR IIRRLGTLPG LTSKTPESKP SYINQSTSSR KISQYRIRLE EKQKLRFHYG
ITERQLLKYV RIARKAKGST GQVLLQLLEM RLDNIIFRLG LAPTIPGARQ LVNHRHVLVN
DCTVDIPSFR CKPQDVITIR DRQKSQNLMK RSRDSYEKYG IPNHLTFNSV QNIGLVNETI
DRDWIGLKIN ELLVVEYYSR QA