RR4_EPIVI
ID RR4_EPIVI Reviewed; 202 AA.
AC P30056;
DT 01-APR-1993, integrated into UniProtKB/Swiss-Prot.
DT 01-APR-1993, sequence version 1.
DT 25-MAY-2022, entry version 94.
DE RecName: Full=Plastid 30S ribosomal protein S4;
GN Name=rps4;
OS Epifagus virginiana (Beechdrops) (Orobanche virginiana).
OG Plastid; Non-photosynthetic plastid.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Lamiales; Orobanchaceae; Orobancheae; Epifagus.
OX NCBI_TaxID=4177;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=1332054; DOI=10.1073/pnas.89.22.10648;
RA Wolfe K.H., Morden C.W., Palmer J.D.;
RT "Function and evolution of a minimal plastid genome from a
RT nonphotosynthetic parasitic plant.";
RL Proc. Natl. Acad. Sci. U.S.A. 89:10648-10652(1992).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=1404416; DOI=10.1007/bf00161168;
RA Wolfe K.H., Morden C.W., Ems S.C., Palmer J.D.;
RT "Rapid evolution of the plastid translational apparatus in a
RT nonphotosynthetic plant: loss or accelerated sequence evolution of tRNA and
RT ribosomal protein genes.";
RL J. Mol. Evol. 35:304-317(1992).
CC -!- FUNCTION: One of the primary rRNA binding proteins, it binds directly
CC to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
CC {ECO:0000250}.
CC -!- FUNCTION: With S5 and S12 plays an important role in translational
CC accuracy. {ECO:0000250}.
CC -!- SUBUNIT: Part of the 30S ribosomal subunit. Contacts protein S5. The
CC interaction surface between S4 and S5 is involved in control of
CC translational fidelity (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Plastid.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uS4 family.
CC {ECO:0000305}.
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DR EMBL; M81884; AAA65853.1; -; Genomic_DNA.
DR PIR; S78382; S78382.
DR RefSeq; NP_054379.1; NC_001568.1.
DR AlphaFoldDB; P30056; -.
DR SMR; P30056; -.
DR PRIDE; P30056; -.
DR GeneID; 801419; -.
DR GO; GO:0009536; C:plastid; IEA:UniProtKB-SubCell.
DR GO; GO:0015935; C:small ribosomal subunit; IEA:InterPro.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR CDD; cd00165; S4; 1.
DR Gene3D; 3.10.290.10; -; 1.
DR HAMAP; MF_01306_B; Ribosomal_S4_B; 1.
DR InterPro; IPR022801; Ribosomal_S4/S9.
DR InterPro; IPR001912; Ribosomal_S4/S9_N.
DR InterPro; IPR005709; Ribosomal_S4_bac-type.
DR InterPro; IPR018079; Ribosomal_S4_CS.
DR InterPro; IPR002942; S4_RNA-bd.
DR InterPro; IPR036986; S4_RNA-bd_sf.
DR PANTHER; PTHR11831; PTHR11831; 1.
DR Pfam; PF00163; Ribosomal_S4; 1.
DR Pfam; PF01479; S4; 1.
DR SMART; SM01390; Ribosomal_S4; 1.
DR SMART; SM00363; S4; 1.
DR TIGRFAMs; TIGR01017; rpsD_bact; 1.
DR PROSITE; PS00632; RIBOSOMAL_S4; 1.
DR PROSITE; PS50889; S4; 1.
PE 3: Inferred from homology;
KW Plastid; Ribonucleoprotein; Ribosomal protein; RNA-binding; rRNA-binding.
FT CHAIN 1..202
FT /note="Plastid 30S ribosomal protein S4"
FT /id="PRO_0000132572"
FT DOMAIN 89..152
FT /note="S4 RNA-binding"
SQ SEQUENCE 202 AA; 23824 MW; 78857286516BA691 CRC64;
MSRYRGPSLK KIRRLGALPG LTNKRSKAEN DFIKKLRSDK KSQYRIRLEE KQKLRFNYGL
RERQLRKYFS IAIKTRGSTG KVLMQLLEMR LDNIIFRLGM ASTIPAARQL VNHRHVLVNG
RIVDIPSYRC KSRDIIMARD EQQSNTFINN CINYSTHNRM EAPNHLTLLH PFKGLVNQII
DSKWVGFKIN ELLVVEYYFR KT