RRAB_ALTMD
ID RRAB_ALTMD Reviewed; 132 AA.
AC B4RWP8; F2G2N2;
DT 08-FEB-2011, integrated into UniProtKB/Swiss-Prot.
DT 23-SEP-2008, sequence version 1.
DT 25-MAY-2022, entry version 66.
DE RecName: Full=Regulator of ribonuclease activity B {ECO:0000255|HAMAP-Rule:MF_01888};
GN Name=rraB {ECO:0000255|HAMAP-Rule:MF_01888};
GN OrderedLocusNames=MADE_1016015;
OS Alteromonas mediterranea (strain DSM 17117 / CIP 110805 / LMG 28347 / Deep
OS ecotype).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
OC Alteromonadaceae; Alteromonas/Salinimonas group; Alteromonas.
OX NCBI_TaxID=1774373;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 17117 / CIP 110805 / LMG 28347 / Deep ecotype;
RX PubMed=18670397; DOI=10.1038/ismej.2008.74;
RA Ivars-Martinez E., Martin-Cuadrado A.-B., D'Auria G., Mira A., Ferriera S.,
RA Johnson J., Friedman R., Rodriguez-Valera F.;
RT "Comparative genomics of two ecotypes of the marine planktonic copiotroph
RT Alteromonas macleodii suggests alternative lifestyles associated with
RT different kinds of particulate organic matter.";
RL ISME J. 2:1194-1212(2008).
CC -!- FUNCTION: Globally modulates RNA abundance by binding to RNase E (Rne)
CC and regulating its endonucleolytic activity. Can modulate Rne action in
CC a substrate-dependent manner by altering the composition of the
CC degradosome. {ECO:0000255|HAMAP-Rule:MF_01888}.
CC -!- SUBUNIT: Interacts with the C-terminal region of Rne.
CC {ECO:0000255|HAMAP-Rule:MF_01888}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_01888}.
CC -!- SIMILARITY: Belongs to the RraB family. {ECO:0000255|HAMAP-
CC Rule:MF_01888}.
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DR EMBL; CP001103; AEA99333.1; -; Genomic_DNA.
DR RefSeq; WP_012519625.1; NC_011138.3.
DR AlphaFoldDB; B4RWP8; -.
DR SMR; B4RWP8; -.
DR EnsemblBacteria; AEA99333; AEA99333; MADE_1016015.
DR GeneID; 56343476; -.
DR KEGG; amc:MADE_1016015; -.
DR HOGENOM; CLU_128640_0_0_6; -.
DR OMA; FCFDAIA; -.
DR Proteomes; UP000001870; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0060698; F:endoribonuclease inhibitor activity; IEA:UniProtKB-UniRule.
DR GO; GO:0019899; F:enzyme binding; IEA:UniProtKB-UniRule.
DR Gene3D; 3.30.70.970; -; 1.
DR HAMAP; MF_01888; RraB; 1.
DR InterPro; IPR016716; RraB.
DR InterPro; IPR036701; RraB-like_sf.
DR InterPro; IPR009671; RraB_dom.
DR Pfam; PF06877; RraB; 1.
DR PIRSF; PIRSF018193; UCP018193; 1.
DR SUPFAM; SSF89946; SSF89946; 1.
PE 3: Inferred from homology;
KW Cytoplasm.
FT CHAIN 1..132
FT /note="Regulator of ribonuclease activity B"
FT /id="PRO_0000404304"
SQ SEQUENCE 132 AA; 15238 MW; EF4D8EDF1E68388D CRC64;
MNQFDEREEW YAFNQETIDA LLEDGSQADA DYTIEHHFAS TDFDVLEKAA VDAFKAGFEV
TDAEELMLDD GETIFCFDAV VERKLDIEKL NADADALLKI ADKHDVTYDG WGTYFEPREE
GEYEEEEHHL ND