RRP12_CHICK
ID RRP12_CHICK Reviewed; 1294 AA.
AC Q5ZKD5;
DT 19-JUL-2005, integrated into UniProtKB/Swiss-Prot.
DT 23-NOV-2004, sequence version 1.
DT 03-AUG-2022, entry version 85.
DE RecName: Full=RRP12-like protein;
GN Name=RRP12; ORFNames=RCJMB04_11j1;
OS Gallus gallus (Chicken).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae;
OC Phasianinae; Gallus.
OX NCBI_TaxID=9031;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=CB; TISSUE=Bursa of Fabricius;
RX PubMed=15642098; DOI=10.1186/gb-2004-6-1-r6;
RA Caldwell R.B., Kierzek A.M., Arakawa H., Bezzubov Y., Zaim J., Fiedler P.,
RA Kutter S., Blagodatski A., Kostovska D., Koter M., Plachy J., Carninci P.,
RA Hayashizaki Y., Buerstedde J.-M.;
RT "Full-length cDNAs from chicken bursal lymphocytes to facilitate gene
RT function analysis.";
RL Genome Biol. 6:R6.1-R6.9(2005).
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus {ECO:0000250}. Nucleus
CC membrane {ECO:0000250}; Single-pass membrane protein {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the RRP12 family. {ECO:0000305}.
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DR EMBL; AJ720149; CAG31808.1; -; mRNA.
DR RefSeq; NP_001012926.1; NM_001012908.1.
DR AlphaFoldDB; Q5ZKD5; -.
DR STRING; 9031.ENSGALP00000012282; -.
DR PaxDb; Q5ZKD5; -.
DR GeneID; 423845; -.
DR KEGG; gga:423845; -.
DR CTD; 23223; -.
DR VEuPathDB; HostDB:geneid_423845; -.
DR eggNOG; KOG1248; Eukaryota.
DR InParanoid; Q5ZKD5; -.
DR OrthoDB; 833555at2759; -.
DR PhylomeDB; Q5ZKD5; -.
DR PRO; PR:Q5ZKD5; -.
DR Proteomes; UP000000539; Unplaced.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0005730; C:nucleolus; IBA:GO_Central.
DR GO; GO:0006364; P:rRNA processing; IBA:GO_Central.
DR Gene3D; 1.25.10.10; -; 2.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR012978; Uncharacterised_NUC173.
DR Pfam; PF08161; NUC173; 1.
DR SUPFAM; SSF48371; SSF48371; 1.
PE 2: Evidence at transcript level;
KW Membrane; Nucleus; Reference proteome; Transmembrane; Transmembrane helix.
FT CHAIN 1..1294
FT /note="RRP12-like protein"
FT /id="PRO_0000050770"
FT TRANSMEM 905..925
FT /note="Helical"
FT /evidence="ECO:0000255"
FT REGION 66..92
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1049..1144
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1178..1225
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1255..1294
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1049..1068
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1178..1198
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1294 AA; 144053 MW; D9F0BAB705FAA92F CRC64;
MARCGRLRAG TAAKLRRWRK GHSSDCNPET RRHRLAARSR FYSRPTEKSN LTVDAVKLHN
ELQSGSLRVE RPSGSSQLPM EEGDAGEAAT ERSSGTFLSG LSDCTNVTFS RVQRFWESNS
AAHKEICAVL AAVTDVIRSQ GGKETETEYF AALMTTLEAV DSPESVAAVA YLLNLVLKRV
PSPVLIKKFS DASKAFMNII SSQACSGSTS ALRWVLSCLA TLLRKQDLAA WSYPVTLQVY
HGLLSFCVHT KPKVRKAAQH GVCSVLRGSE FMFGDEAPEH HPAAPSSAKF CVQEIEKAGG
TKEATTTLHV LALLRDLLPC FPAAVLKTCC ETLLRVMTLS HVLVTACAMQ AFHSLFSAQP
RTSCLPAELN AQIITALYDY VPSANDLQPL LTWLTTMERA HVNLGRLQKD LCWAHLPRLF
SATMNCFLSP HLQVVAAAAQ TLETLLNECI APHMDELGNV SASTPAPGSY LCKMFRSVEE
GLTYRFHAAW DGVLQVLEVF FEVCGKQCHP IMRKCLQSLC DLRLSPHFPY TTEVDQAVGA
AVGAMGPEVL LEAVPLQIDG KEETLDFPRS WLLPVLRDYV QGARLGFFTS YFLPLAATLK
SRALEFAQAG KSLESKIYDT LQWQVWTLLP GFCTRPTDVV EAFKGLARTL GMAISERPDL
RPTVCQALRT LIHHGCGTDA ERAEVGRFAK NFLPILFNVY SQPEEDGGSS SQRRSVLDTV
RAYLTITDPQ LGCGFLQKAS EKLTSPESSE FARLSILDLV VAMSPYANEQ ALGSLYRTIQ
PSLQSKDHSM QKKAYRVLEE VCAAPHAPCQ AFVHSHLEEL QAVLLDSLKS AASPAKRPRL
KCLFHIMKQL SAEHEPFVTA LVPEVILCTK EVSVGARKNA FMLLVEMGHA FIRFGPTPQE
AMERFLLLVY AGLTGSVTMI SCTVLALTRL FFEFRDHMEL NVVEQLLQNI CLLLGSRTRD
VVKAALGFIK VVLLLVDTTL LAKHVQTMLE AVGSLSDDMR RHFRMKLRNL FTKFIRKFGF
ELVQGLLPAE FHKVLVNIRK AEARSRKQRA LRQAAAEAEE EEAPAQPKGD SMEEILADSE
EEEEEEEERR RGKVRKKQAR QKGQAWLKEG EEDEPLNFLD PNVSQRVLAT EPSLKKSRGV
KHDFQVSEDG RLIIHDEEEE VDNDEAKGVE EEVADVLQEV GLRSKKSQKR RFREEPDDDE
PETGTYSQYR AGGSGIHRPL DKKPAFGAEY RSKKGKGDVK KKGQLDPYAY IPLNRAKLNK
RKQAKMQGQF KGLMKGAQRG AKAGRKNRLK DRRP