RRP8_CAEEL
ID RRP8_CAEEL Reviewed; 343 AA.
AC O44410;
DT 15-DEC-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-1998, sequence version 1.
DT 03-AUG-2022, entry version 126.
DE RecName: Full=Ribosomal RNA-processing protein 8;
DE EC=2.1.1.-;
GN ORFNames=T07A9.8;
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6239;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2;
RX PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for investigating
RT biology.";
RL Science 282:2012-2018(1998).
CC -!- FUNCTION: Probable methyltransferase required to silence rDNA.
CC {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the methyltransferase superfamily. RRP8 family.
CC {ECO:0000305}.
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DR EMBL; FO081716; CCD73979.1; -; Genomic_DNA.
DR PIR; T32579; T32579.
DR RefSeq; NP_499920.1; NM_067519.4.
DR AlphaFoldDB; O44410; -.
DR SMR; O44410; -.
DR BioGRID; 42025; 2.
DR STRING; 6239.T07A9.8; -.
DR EPD; O44410; -.
DR PaxDb; O44410; -.
DR PeptideAtlas; O44410; -.
DR PRIDE; O44410; -.
DR EnsemblMetazoa; T07A9.8.1; T07A9.8.1; WBGene00020296.
DR GeneID; 176864; -.
DR KEGG; cel:CELE_T07A9.8; -.
DR UCSC; T07A9.8; c. elegans.
DR CTD; 176864; -.
DR WormBase; T07A9.8; CE17217; WBGene00020296; -.
DR eggNOG; KOG3045; Eukaryota.
DR GeneTree; ENSGT00390000006189; -.
DR HOGENOM; CLU_027694_2_1_1; -.
DR InParanoid; O44410; -.
DR OMA; KWPTNPL; -.
DR OrthoDB; 962356at2759; -.
DR PhylomeDB; O44410; -.
DR Reactome; R-CEL-427359; SIRT1 negatively regulates rRNA expression.
DR PRO; PR:O44410; -.
DR Proteomes; UP000001940; Chromosome IV.
DR Bgee; WBGene00020296; Expressed in germ line (C elegans) and 4 other tissues.
DR GO; GO:0005677; C:chromatin silencing complex; ISS:UniProtKB.
DR GO; GO:0005730; C:nucleolus; ISS:UniProtKB.
DR GO; GO:0033553; C:rDNA heterochromatin; ISS:UniProtKB.
DR GO; GO:0035064; F:methylated histone binding; ISS:UniProtKB.
DR GO; GO:0008168; F:methyltransferase activity; IEA:UniProtKB-KW.
DR GO; GO:0042149; P:cellular response to glucose starvation; IBA:GO_Central.
DR GO; GO:0032259; P:methylation; IEA:UniProtKB-KW.
DR GO; GO:0000183; P:rDNA heterochromatin assembly; ISS:UniProtKB.
DR GO; GO:0046015; P:regulation of transcription by glucose; IBA:GO_Central.
DR GO; GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
DR Gene3D; 1.10.10.2150; -; 1.
DR Gene3D; 3.40.50.150; -; 1.
DR InterPro; IPR007823; RRP8.
DR InterPro; IPR042036; RRP8_N.
DR InterPro; IPR029063; SAM-dependent_MTases_sf.
DR PANTHER; PTHR12787; PTHR12787; 1.
DR Pfam; PF05148; Methyltransf_8; 1.
DR SUPFAM; SSF53335; SSF53335; 1.
PE 3: Inferred from homology;
KW Chromatin regulator; Methyltransferase; Nucleus; Reference proteome;
KW Repressor; rRNA processing; S-adenosyl-L-methionine; Transcription;
KW Transcription regulation; Transferase.
FT CHAIN 1..343
FT /note="Ribosomal RNA-processing protein 8"
FT /id="PRO_0000390456"
FT REGION 1..123
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..47
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 58..74
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 169
FT /ligand="S-adenosyl-L-methionine"
FT /ligand_id="ChEBI:CHEBI:59789"
FT /evidence="ECO:0000250|UniProtKB:O43159"
FT BINDING 204
FT /ligand="S-adenosyl-L-methionine"
FT /ligand_id="ChEBI:CHEBI:59789"
FT /evidence="ECO:0000250|UniProtKB:O43159"
FT BINDING 224
FT /ligand="S-adenosyl-L-methionine"
FT /ligand_id="ChEBI:CHEBI:59789"
FT /evidence="ECO:0000250|UniProtKB:O43159"
FT BINDING 236
FT /ligand="S-adenosyl-L-methionine"
FT /ligand_id="ChEBI:CHEBI:59789"
FT /evidence="ECO:0000250|UniProtKB:O43159"
FT BINDING 237
FT /ligand="S-adenosyl-L-methionine"
FT /ligand_id="ChEBI:CHEBI:59789"
FT /evidence="ECO:0000250|UniProtKB:O43159"
FT BINDING 253
FT /ligand="S-adenosyl-L-methionine"
FT /ligand_id="ChEBI:CHEBI:59789"
FT /evidence="ECO:0000250|UniProtKB:O43159"
SQ SEQUENCE 343 AA; 39448 MW; FA12BDFF6756537B CRC64;
MGKKRKITDE KDAQHVPAEK REKVENWLKK STEKPTSSQS DAEKKKKRPW RNKVRKLAAK
KAAADKKSEN PEEPPLILEP KSSSDENTKK KRKRGPKKKK FKPEVAGKAA ETENDDVAAA
PEEADPIAEA KKRLDAGRFR FLNEKLYTCT GSEAFDFFKE DPTAFDLYHK GFADQVKKWP
NHPLREIIRW LQSKPDQQSV FDLGCGEAKI AEAVGEKHKI RSFDLVAVND RVESCDMSKL
PAEDSSADIV IYCLSLMGTN LYDFIREARR VLKIGGILKI AEVTSRFVSI KQFCEAITKM
GFEQSHRREL TDYFMMMEFK KVEKVEQKRP YGLKLKPCLY KKR