RS103_ARATH
ID RS103_ARATH Reviewed; 179 AA.
AC Q9LTF2; Q8VZ66;
DT 19-DEC-2001, integrated into UniProtKB/Swiss-Prot.
DT 20-DEC-2005, sequence version 2.
DT 25-MAY-2022, entry version 135.
DE RecName: Full=40S ribosomal protein S10-3;
GN Name=RPS10C; OrderedLocusNames=At5g52650; ORFNames=F6N7.14;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RA Kaneko T., Katoh T., Asamizu E., Sato S., Nakamura Y., Kotani H.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. XI.";
RL Submitted (APR-1999) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP GENE FAMILY ORGANIZATION, AND NOMENCLATURE.
RX PubMed=11598216; DOI=10.1104/pp.010265;
RA Barakat A., Szick-Miranda K., Chang I.-F., Guyot R., Blanc G., Cooke R.,
RA Delseny M., Bailey-Serres J.;
RT "The organization of cytoplasmic ribosomal protein genes in the Arabidopsis
RT genome.";
RL Plant Physiol. 127:398-415(2001).
CC -!- INTERACTION:
CC Q9LTF2; Q9S851: NAC031; NbExp=3; IntAct=EBI-4458966, EBI-15206626;
CC Q9LTF2; Q9SK33: WRKY60; NbExp=4; IntAct=EBI-4458966, EBI-2112777;
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the eukaryotic ribosomal protein eS10 family.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAA98083.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AB025606; BAA98083.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002688; AED96245.1; -; Genomic_DNA.
DR EMBL; AY065217; AAL38693.1; -; mRNA.
DR EMBL; AY088678; AAM67000.1; -; mRNA.
DR EMBL; AY122932; AAM67465.1; -; mRNA.
DR RefSeq; NP_200077.1; NM_124643.4.
DR AlphaFoldDB; Q9LTF2; -.
DR SMR; Q9LTF2; -.
DR BioGRID; 20587; 41.
DR IntAct; Q9LTF2; 8.
DR STRING; 3702.AT5G52650.1; -.
DR iPTMnet; Q9LTF2; -.
DR MetOSite; Q9LTF2; -.
DR PaxDb; Q9LTF2; -.
DR PRIDE; Q9LTF2; -.
DR ProteomicsDB; 226750; -.
DR EnsemblPlants; AT5G52650.1; AT5G52650.1; AT5G52650.
DR GeneID; 835342; -.
DR Gramene; AT5G52650.1; AT5G52650.1; AT5G52650.
DR KEGG; ath:AT5G52650; -.
DR Araport; AT5G52650; -.
DR TAIR; locus:2149579; AT5G52650.
DR eggNOG; KOG3344; Eukaryota.
DR HOGENOM; CLU_089349_0_2_1; -.
DR InParanoid; Q9LTF2; -.
DR OMA; CSHPEAD; -.
DR OrthoDB; 1588066at2759; -.
DR PhylomeDB; Q9LTF2; -.
DR PRO; PR:Q9LTF2; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9LTF2; baseline and differential.
DR Genevisible; Q9LTF2; AT.
DR GO; GO:0022626; C:cytosolic ribosome; HDA:TAIR.
DR GO; GO:0022627; C:cytosolic small ribosomal subunit; HDA:TAIR.
DR GO; GO:0009505; C:plant-type cell wall; HDA:TAIR.
DR GO; GO:0009536; C:plastid; HDA:TAIR.
DR GO; GO:0042788; C:polysomal ribosome; IDA:CAFA.
DR GO; GO:0003729; F:mRNA binding; IDA:TAIR.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0003735; F:structural constituent of ribosome; IDA:CAFA.
DR Gene3D; 1.10.10.10; -; 1.
DR InterPro; IPR037447; Rps10.
DR InterPro; IPR005326; S10_plectin_N.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR12146; PTHR12146; 1.
DR Pfam; PF03501; S10_plectin; 1.
PE 1: Evidence at protein level;
KW Cytoplasm; Reference proteome; Ribonucleoprotein; Ribosomal protein.
FT CHAIN 1..179
FT /note="40S ribosomal protein S10-3"
FT /id="PRO_0000116372"
FT REGION 90..179
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 109..132
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 179 AA; 19551 MW; 70EEFE8FD2D16260 CRC64;
MIISEANRKE ICKYLFKEGV CFAKKDFNLA KHPLIDVPNL QVIKLMQSFK SKEYVRETFA
WMHYYWFLTN EGIEFLRTYL NLPSDVVPAT LKKSAKPGGR PFGGPPGDRS RGPRHEGGDR
PRFGDRDGYR AGPRAGGEFG GEKGGAPADY QPSFQGSGRG FGRGAGGYSA AAPSGSGLP
