RS113_ARATH
ID RS113_ARATH Reviewed; 159 AA.
AC P42733; Q9FFA6;
DT 01-NOV-1995, integrated into UniProtKB/Swiss-Prot.
DT 10-JAN-2003, sequence version 2.
DT 25-MAY-2022, entry version 140.
DE RecName: Full=40S ribosomal protein S11-3;
GN Name=RPS11C; OrderedLocusNames=At5g23740; ORFNames=MRO11.22;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RX PubMed=8108522; DOI=10.1104/pp.102.2.695;
RA Lu G., Wu K., Ferl R.J.;
RT "A cDNA for Arabidopsis cytosol ribosomal protein S11.";
RL Plant Physiol. 102:695-696(1993).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9330910; DOI=10.1093/dnares/4.3.215;
RA Sato S., Kotani H., Nakamura Y., Kaneko T., Asamizu E., Fukami M.,
RA Miyajima N., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. I. Sequence
RT features of the 1.6 Mb regions covered by twenty physically assigned P1
RT clones.";
RL DNA Res. 4:215-230(1997).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN [6]
RP GENE FAMILY ORGANIZATION, AND NOMENCLATURE.
RX PubMed=11598216; DOI=10.1104/pp.010265;
RA Barakat A., Szick-Miranda K., Chang I.-F., Guyot R., Blanc G., Cooke R.,
RA Delseny M., Bailey-Serres J.;
RT "The organization of cytoplasmic ribosomal protein genes in the Arabidopsis
RT genome.";
RL Plant Physiol. 127:398-415(2001).
CC -!- SUBCELLULAR LOCATION: Cytoplasm.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uS17 family.
CC {ECO:0000305}.
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DR EMBL; L07877; AAA32867.1; -; mRNA.
DR EMBL; AB005244; BAB10047.1; -; Genomic_DNA.
DR EMBL; CP002688; AED93206.1; -; Genomic_DNA.
DR EMBL; AF360280; AAK25990.1; -; mRNA.
DR EMBL; AY062955; AAL33787.1; -; mRNA.
DR EMBL; AY087240; AAM64796.1; -; mRNA.
DR RefSeq; NP_197763.1; NM_122279.4.
DR AlphaFoldDB; P42733; -.
DR SMR; P42733; -.
DR BioGRID; 17714; 173.
DR STRING; 3702.AT5G23740.1; -.
DR iPTMnet; P42733; -.
DR PaxDb; P42733; -.
DR PRIDE; P42733; -.
DR ProteomicsDB; 226561; -.
DR EnsemblPlants; AT5G23740.1; AT5G23740.1; AT5G23740.
DR GeneID; 832439; -.
DR Gramene; AT5G23740.1; AT5G23740.1; AT5G23740.
DR KEGG; ath:AT5G23740; -.
DR Araport; AT5G23740; -.
DR TAIR; locus:2172783; AT5G23740.
DR eggNOG; KOG1728; Eukaryota.
DR HOGENOM; CLU_073626_0_2_1; -.
DR InParanoid; P42733; -.
DR OMA; GICHSAK; -.
DR OrthoDB; 1325168at2759; -.
DR PhylomeDB; P42733; -.
DR PRO; PR:P42733; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; P42733; baseline and differential.
DR Genevisible; P42733; AT.
DR GO; GO:0022627; C:cytosolic small ribosomal subunit; IBA:GO_Central.
DR GO; GO:0009536; C:plastid; HDA:TAIR.
DR GO; GO:0003729; F:mRNA binding; IDA:TAIR.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR032440; Ribosomal_S11_N.
DR InterPro; IPR000266; Ribosomal_S17/S11.
DR InterPro; IPR028333; Ribosomal_S17_arc-typ.
DR InterPro; IPR019979; Ribosomal_S17_CS.
DR PANTHER; PTHR10744; PTHR10744; 1.
DR Pfam; PF00366; Ribosomal_S17; 1.
DR Pfam; PF16205; Ribosomal_S17_N; 1.
DR PRINTS; PR00973; RIBOSOMALS17.
DR SUPFAM; SSF50249; SSF50249; 1.
DR TIGRFAMs; TIGR03630; uS17_arch; 1.
DR PROSITE; PS00056; RIBOSOMAL_S17; 1.
PE 2: Evidence at transcript level;
KW Cytoplasm; Reference proteome; Ribonucleoprotein; Ribosomal protein;
KW RNA-binding; rRNA-binding.
FT CHAIN 1..159
FT /note="40S ribosomal protein S11-3"
FT /id="PRO_0000128517"
FT CONFLICT 90
FT /note="N -> D (in Ref. 1; AAA32867)"
FT /evidence="ECO:0000305"
FT CONFLICT 99
FT /note="Q -> P (in Ref. 1; AAA32867)"
FT /evidence="ECO:0000305"
FT CONFLICT 107
FT /note="N -> H (in Ref. 1; AAA32867)"
FT /evidence="ECO:0000305"
FT CONFLICT 146
FT /note="A -> T (in Ref. 1; AAA32867)"
FT /evidence="ECO:0000305"
FT CONFLICT 156
FT /note="F -> L (in Ref. 1; AAA32867)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 159 AA; 17749 MW; 113DF30E5BD1876B CRC64;
MAEQTEKAFL KQPKVFLSSK ISGKGKRPGK GGNRFWKNIG LGFKTPREAI DGAYIDSKCP
FTGTVSIRGR ILAGTCHSAK MQRTIIVRRN YLHFVKKYQR YEKRHSNIPA HVSPCFRVKE
GDHVIIGQCR PLSKTVRFNV LKVIPAGASA FGKKAFTGV
