AZIS_OCIBA
ID AZIS_OCIBA Reviewed; 541 AA.
AC Q5SBP4;
DT 05-OCT-2010, integrated into UniProtKB/Swiss-Prot.
DT 21-DEC-2004, sequence version 1.
DT 03-AUG-2022, entry version 60.
DE RecName: Full=Alpha-zingiberene synthase;
DE EC=4.2.3.65;
GN Name=ZIS;
OS Ocimum basilicum (Sweet basil).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ociminae;
OC Ocimum.
OX NCBI_TaxID=39350;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, AND CATALYTIC ACTIVITY.
RX PubMed=15516500; DOI=10.1104/pp.104.051318;
RA Iijima Y., Davidovich-Rikanati R., Fridman E., Gang D.R., Bar E.,
RA Lewinsohn E., Pichersky E.;
RT "The biochemical and molecular basis for the divergent patterns in the
RT biosynthesis of terpenes and phenylpropenes in the peltate glands of three
RT cultivars of basil.";
RL Plant Physiol. 136:3724-3736(2004).
RN [2]
RP FUNCTION.
RX PubMed=18643974; DOI=10.1111/j.1365-313x.2008.03599.x;
RA Davidovich-Rikanati R., Lewinsohn E., Bar E., Iijima Y., Pichersky E.,
RA Sitrit Y.;
RT "Overexpression of the lemon basil alpha-zingiberene synthase gene
RT increases both mono- and sesquiterpene contents in tomato fruit.";
RL Plant J. 56:228-238(2008).
CC -!- FUNCTION: Sesquiterpene synthase that catalyzes the formation of alpha-
CC zingiberene and other sesquiterpenes from trans,trans-farnesyl
CC diphosphate (FPP). May have an additional monoterpene synthase
CC activity. {ECO:0000269|PubMed:15516500, ECO:0000269|PubMed:18643974}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=(2E,6E)-farnesyl diphosphate = alpha-zingiberene +
CC diphosphate; Xref=Rhea:RHEA:28643, ChEBI:CHEBI:10115,
CC ChEBI:CHEBI:33019, ChEBI:CHEBI:175763; EC=4.2.3.65;
CC Evidence={ECO:0000269|PubMed:15516500};
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420; Evidence={ECO:0000250};
CC Name=Mn(2+); Xref=ChEBI:CHEBI:29035; Evidence={ECO:0000250};
CC Note=Binds 3 Mg(2+) or Mn(2+) ions per subunit. {ECO:0000250};
CC -!- PATHWAY: Secondary metabolite biosynthesis; terpenoid biosynthesis.
CC -!- DOMAIN: The Asp-Asp-Xaa-Xaa-Asp/Glu (DDXXD/E) motif is important for
CC the catalytic activity, presumably through binding to Mg(2+).
CC -!- SIMILARITY: Belongs to the terpene synthase family. {ECO:0000305}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AY693646; AAV63788.1; -; mRNA.
DR AlphaFoldDB; Q5SBP4; -.
DR SMR; Q5SBP4; -.
DR KEGG; ag:AAV63788; -.
DR BRENDA; 4.2.3.65; 4385.
DR UniPathway; UPA00213; -.
DR GO; GO:0102884; F:alpha-zingiberene synthase activity; IEA:UniProtKB-EC.
DR GO; GO:0000287; F:magnesium ion binding; IEA:InterPro.
DR GO; GO:0010333; F:terpene synthase activity; IEA:InterPro.
DR GO; GO:0016102; P:diterpenoid biosynthetic process; IEA:InterPro.
DR CDD; cd00684; Terpene_cyclase_plant_C1; 1.
DR Gene3D; 1.10.600.10; -; 1.
DR Gene3D; 1.50.10.130; -; 1.
DR InterPro; IPR008949; Isoprenoid_synthase_dom_sf.
DR InterPro; IPR034741; Terpene_cyclase-like_1_C.
DR InterPro; IPR044814; Terpene_cyclase_plant_C1.
DR InterPro; IPR001906; Terpene_synth_N.
DR InterPro; IPR036965; Terpene_synth_N_sf.
DR InterPro; IPR005630; Terpene_synthase_metal-bd.
DR InterPro; IPR008930; Terpenoid_cyclase/PrenylTrfase.
DR Pfam; PF01397; Terpene_synth; 1.
DR Pfam; PF03936; Terpene_synth_C; 1.
DR SFLD; SFLDG01019; Terpene_Cyclase_Like_1_C_Termi; 1.
DR SUPFAM; SSF48239; SSF48239; 1.
DR SUPFAM; SSF48576; SSF48576; 1.
PE 1: Evidence at protein level;
KW Lyase; Magnesium; Metal-binding.
FT CHAIN 1..541
FT /note="Alpha-zingiberene synthase"
FT /id="PRO_0000399252"
FT MOTIF 296..300
FT /note="DDXXD motif"
FT BINDING 296
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="1"
FT /evidence="ECO:0000250"
FT BINDING 296
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="2"
FT /evidence="ECO:0000250"
FT BINDING 300
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="1"
FT /evidence="ECO:0000250"
FT BINDING 300
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="2"
FT /evidence="ECO:0000250"
FT BINDING 437
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="3"
FT /evidence="ECO:0000250"
FT BINDING 441
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="3"
FT /evidence="ECO:0000250"
FT BINDING 445
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /ligand_label="3"
FT /evidence="ECO:0000250"
SQ SEQUENCE 541 AA; 62858 MW; FBE67A5DE1732320 CRC64;
MESRRSANYQ ASIWDDNFIQ SLASPYAGEK YAEKAEKLKT EVKTMIDQTR DELKQLELID
NLQRLGICHH FQDLTKKILQ KIYGEERNGD HQHYKEKGLH FTALRFRILR QDGYHVPQDV
FSSFMNKAGD FEESLSKDTK GLVSLYEASY LSMEGETILD MAKDFSSHHL HKMVEDATDK
RVANQIIHSL EMPLHRRVQK LEAIWFIQFY ECGSDANPTL VELAKLDFNM VQATYQEELK
RLSRWYEETG LQEKLSFARH RLAEAFLWSM GIIPEGHFGY GRMHLMKIGA YITLLDDIYD
VYGTLEELQV LTEIIERWDI NLLDQLPEYM QIFFLYMFNS TNELAYEILR DQGINVISNL
KGLWVELSQC YFKEATWFHN GYTPTTEEYL NVACISASGP VILFSGYFTT TNPINKHELQ
SLERHAHSLS MILRLADDLG TSSDEMKRGD VPKAIQCFMN DTGCCEEEAR QHVKRLIDAE
WKKMNKDILM EKPFKNFCPT AMNLGRISMS FYEHGDGYGG PHSDTKKKMV SLFVQPMNIT
I