RS122_ARATH
ID RS122_ARATH Reviewed; 144 AA.
AC Q9SKZ3;
DT 08-DEC-2000, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 25-MAY-2022, entry version 146.
DE RecName: Full=40S ribosomal protein S12-2;
GN Name=RPS12C; OrderedLocusNames=At2g32060; ORFNames=F22D22.19;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP GENE FAMILY ORGANIZATION, AND NOMENCLATURE.
RX PubMed=11598216; DOI=10.1104/pp.010265;
RA Barakat A., Szick-Miranda K., Chang I.-F., Guyot R., Blanc G., Cooke R.,
RA Delseny M., Bailey-Serres J.;
RT "The organization of cytoplasmic ribosomal protein genes in the Arabidopsis
RT genome.";
RL Plant Physiol. 127:398-415(2001).
RN [6]
RP ACETYLATION [LARGE SCALE ANALYSIS] AT SER-2, CLEAVAGE OF INITIATOR
RP METHIONINE [LARGE SCALE ANALYSIS], AND IDENTIFICATION BY MASS SPECTROMETRY
RP [LARGE SCALE ANALYSIS].
RX PubMed=22223895; DOI=10.1074/mcp.m111.015131;
RA Bienvenut W.V., Sumpton D., Martinez A., Lilla S., Espagne C., Meinnel T.,
RA Giglione C.;
RT "Comparative large-scale characterisation of plant vs. mammal proteins
RT reveals similar and idiosyncratic N-alpha acetylation features.";
RL Mol. Cell. Proteomics 11:M111.015131-M111.015131(2012).
CC -!- SIMILARITY: Belongs to the eukaryotic ribosomal protein eS12 family.
CC {ECO:0000305}.
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DR EMBL; AC006223; AAD15398.1; -; Genomic_DNA.
DR EMBL; CP002685; AEC08627.1; -; Genomic_DNA.
DR EMBL; CP002685; AEC08628.1; -; Genomic_DNA.
DR EMBL; CP002685; AEC08629.1; -; Genomic_DNA.
DR EMBL; AY050324; AAK91341.1; -; mRNA.
DR EMBL; AY133636; AAM91466.1; -; mRNA.
DR EMBL; AY085161; AAM61714.1; -; mRNA.
DR PIR; E84728; E84728.
DR RefSeq; NP_001318332.1; NM_001336369.1.
DR RefSeq; NP_180766.1; NM_128766.5.
DR RefSeq; NP_850180.1; NM_179849.4.
DR AlphaFoldDB; Q9SKZ3; -.
DR SMR; Q9SKZ3; -.
DR BioGRID; 3113; 1.
DR STRING; 3702.AT2G32060.1; -.
DR iPTMnet; Q9SKZ3; -.
DR PaxDb; Q9SKZ3; -.
DR PRIDE; Q9SKZ3; -.
DR ProteomicsDB; 226777; -.
DR DNASU; 817766; -.
DR EnsemblPlants; AT2G32060.1; AT2G32060.1; AT2G32060.
DR EnsemblPlants; AT2G32060.2; AT2G32060.2; AT2G32060.
DR EnsemblPlants; AT2G32060.3; AT2G32060.3; AT2G32060.
DR GeneID; 817766; -.
DR Gramene; AT2G32060.1; AT2G32060.1; AT2G32060.
DR Gramene; AT2G32060.2; AT2G32060.2; AT2G32060.
DR Gramene; AT2G32060.3; AT2G32060.3; AT2G32060.
DR KEGG; ath:AT2G32060; -.
DR Araport; AT2G32060; -.
DR TAIR; locus:2045417; AT2G32060.
DR eggNOG; KOG3406; Eukaryota.
DR HOGENOM; CLU_110343_1_1_1; -.
DR InParanoid; Q9SKZ3; -.
DR OMA; DLGQWVG; -.
DR OrthoDB; 1474866at2759; -.
DR PhylomeDB; Q9SKZ3; -.
DR PRO; PR:Q9SKZ3; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; Q9SKZ3; baseline and differential.
DR Genevisible; Q9SKZ3; AT.
DR GO; GO:0022626; C:cytosolic ribosome; HDA:TAIR.
DR GO; GO:0022627; C:cytosolic small ribosomal subunit; HDA:TAIR.
DR GO; GO:0005634; C:nucleus; HDA:TAIR.
DR GO; GO:0005777; C:peroxisome; HDA:TAIR.
DR GO; GO:0042788; C:polysomal ribosome; IDA:CAFA.
DR GO; GO:0003735; F:structural constituent of ribosome; IDA:CAFA.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR Gene3D; 3.30.1330.30; -; 1.
DR InterPro; IPR029064; L30e-like.
DR InterPro; IPR004038; Ribosomal_L7Ae/L30e/S12e/Gad45.
DR InterPro; IPR000530; Ribosomal_S12e.
DR PANTHER; PTHR11843; PTHR11843; 1.
DR Pfam; PF01248; Ribosomal_L7Ae; 1.
DR PRINTS; PR00972; RIBSOMALS12E.
DR SUPFAM; SSF55315; SSF55315; 1.
DR PROSITE; PS01189; RIBOSOMAL_S12E; 1.
PE 1: Evidence at protein level;
KW Acetylation; Reference proteome; Ribonucleoprotein; Ribosomal protein.
FT INIT_MET 1
FT /note="Removed"
FT /evidence="ECO:0007744|PubMed:22223895"
FT CHAIN 2..144
FT /note="40S ribosomal protein S12-2"
FT /id="PRO_0000122335"
FT MOD_RES 2
FT /note="N-acetylserine"
FT /evidence="ECO:0007744|PubMed:22223895"
SQ SEQUENCE 144 AA; 15329 MW; 547C8C2C9AE84B4E CRC64;
MSGDEAVAAP VVPPVAEAAV IPEDMDVSTA LELTVRKSRA YGGVVRGLHE SAKLIEKRNA
QLCVLAEDCN QPDYVKLVKA LCADHSIKLL TVPSAKTLGE WAGLCKIDSE GNARKVVGCS
CLVIKDFGEE TTALNIVKKH LDSN
