RS12_PYRAB
ID RS12_PYRAB Reviewed; 147 AA.
AC P61994; G8ZJ84; Q9V110;
DT 07-JUN-2004, integrated into UniProtKB/Swiss-Prot.
DT 07-JUN-2004, sequence version 1.
DT 25-MAY-2022, entry version 96.
DE RecName: Full=30S ribosomal protein S12 {ECO:0000255|HAMAP-Rule:MF_00403};
GN Name=rps12 {ECO:0000255|HAMAP-Rule:MF_00403}; OrderedLocusNames=PYRAB06190;
GN ORFNames=PAB0427;
OS Pyrococcus abyssi (strain GE5 / Orsay).
OC Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae;
OC Pyrococcus.
OX NCBI_TaxID=272844;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=GE5 / Orsay;
RX PubMed=12622808; DOI=10.1046/j.1365-2958.2003.03381.x;
RA Cohen G.N., Barbe V., Flament D., Galperin M., Heilig R., Lecompte O.,
RA Poch O., Prieur D., Querellou J., Ripp R., Thierry J.-C., Van der Oost J.,
RA Weissenbach J., Zivanovic Y., Forterre P.;
RT "An integrated analysis of the genome of the hyperthermophilic archaeon
RT Pyrococcus abyssi.";
RL Mol. Microbiol. 47:1495-1512(2003).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=GE5 / Orsay;
RX PubMed=22057919; DOI=10.1007/s00284-011-0035-x;
RA Gao J., Wang J.;
RT "Re-annotation of two hyperthermophilic archaea Pyrococcus abyssi GE5 and
RT Pyrococcus furiosus DSM 3638.";
RL Curr. Microbiol. 64:118-129(2012).
CC -!- FUNCTION: With S4 and S5 plays an important role in translational
CC accuracy. Located at the interface of the 30S and 50S subunits.
CC {ECO:0000255|HAMAP-Rule:MF_00403}.
CC -!- SUBUNIT: Part of the 30S ribosomal subunit. {ECO:0000255|HAMAP-
CC Rule:MF_00403}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uS12 family.
CC {ECO:0000255|HAMAP-Rule:MF_00403}.
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DR EMBL; AJ248284; CAB49541.1; -; Genomic_DNA.
DR EMBL; HE613800; CCE70011.1; -; Genomic_DNA.
DR PIR; F75182; F75182.
DR RefSeq; WP_010867743.1; NC_000868.1.
DR PDB; 5JB3; EM; 5.34 A; N=1-147.
DR PDB; 5JBH; EM; 5.34 A; N=1-147.
DR PDB; 6SW9; EM; 4.20 A; N=1-147.
DR PDB; 6SWC; EM; 3.30 A; N=1-147.
DR PDB; 6SWD; EM; 3.20 A; N=1-147.
DR PDBsum; 5JB3; -.
DR PDBsum; 5JBH; -.
DR PDBsum; 6SW9; -.
DR PDBsum; 6SWC; -.
DR PDBsum; 6SWD; -.
DR AlphaFoldDB; P61994; -.
DR SMR; P61994; -.
DR STRING; 272844.PAB0427; -.
DR EnsemblBacteria; CAB49541; CAB49541; PAB0427.
DR GeneID; 41713380; -.
DR KEGG; pab:PAB0427; -.
DR PATRIC; fig|272844.11.peg.657; -.
DR eggNOG; arCOG04255; Archaea.
DR HOGENOM; CLU_115574_0_1_2; -.
DR OMA; KFRWSQR; -.
DR OrthoDB; 85293at2157; -.
DR PhylomeDB; P61994; -.
DR Proteomes; UP000000810; Chromosome.
DR Proteomes; UP000009139; Chromosome.
DR GO; GO:0015935; C:small ribosomal subunit; IEA:InterPro.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR CDD; cd03367; Ribosomal_S23; 1.
DR Gene3D; 2.40.50.140; -; 1.
DR HAMAP; MF_00403_A; Ribosomal_S12_A; 1.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR006032; Ribosomal_S12/S23.
DR InterPro; IPR022863; Ribosomal_S12_arc.
DR InterPro; IPR005680; Ribosomal_S23_euk/arc.
DR PANTHER; PTHR11652; PTHR11652; 1.
DR Pfam; PF00164; Ribosom_S12_S23; 1.
DR PIRSF; PIRSF002133; Ribosomal_S12/S23; 1.
DR SUPFAM; SSF50249; SSF50249; 1.
DR TIGRFAMs; TIGR00982; uS12_E_A; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Ribonucleoprotein; Ribosomal protein; RNA-binding;
KW rRNA-binding.
FT CHAIN 1..147
FT /note="30S ribosomal protein S12"
FT /id="PRO_0000146376"
FT STRAND 9..11
FT /evidence="ECO:0007829|PDB:6SWD"
FT HELIX 13..23
FT /evidence="ECO:0007829|PDB:6SWD"
FT HELIX 24..26
FT /evidence="ECO:0007829|PDB:6SWD"
FT HELIX 31..34
FT /evidence="ECO:0007829|PDB:6SWD"
FT STRAND 50..61
FT /evidence="ECO:0007829|PDB:6SWD"
FT STRAND 69..80
FT /evidence="ECO:0007829|PDB:6SWD"
FT STRAND 83..87
FT /evidence="ECO:0007829|PDB:6SWD"
FT HELIX 93..96
FT /evidence="ECO:0007829|PDB:6SWD"
FT STRAND 102..107
FT /evidence="ECO:0007829|PDB:6SWD"
FT HELIX 111..113
FT /evidence="ECO:0007829|PDB:6SWD"
FT STRAND 124..129
FT /evidence="ECO:0007829|PDB:6SWD"
FT HELIX 134..138
FT /evidence="ECO:0007829|PDB:6SWD"
FT STRAND 140..142
FT /evidence="ECO:0007829|PDB:6SWD"
SQ SEQUENCE 147 AA; 16439 MW; B8E77B974B2CF5CB CRC64;
MPGKKAPNGE FAGRKLKLKR KKFRWSDIRY KRRVLRLKEK SDPLEGAPQA RGIVLEKIAV
EAKQPNSGMR KAVRVQLIKN GKVVTAFCPG DGAIKFIDEH DEVIIEGIGG PKGGSMGDIP
GIRYKVVKVN RVSLKELVKG RKEKPRR
