RS13_CHICK
ID RS13_CHICK Reviewed; 151 AA.
AC Q6ITC7;
DT 16-AUG-2004, integrated into UniProtKB/Swiss-Prot.
DT 23-JAN-2007, sequence version 3.
DT 03-AUG-2022, entry version 114.
DE RecName: Full=40S ribosomal protein S13;
GN Name=RPS13;
OS Gallus gallus (Chicken).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae;
OC Phasianinae; Gallus.
OX NCBI_TaxID=9031;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC TISSUE=Liver;
RA Li L., Zhu Q., Zhao X.-L., Li Q.;
RT "Primary analysis of ribosome related genes in chicken.";
RL Submitted (MAY-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uS15 family.
CC {ECO:0000305}.
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DR EMBL; AY626809; AAT44861.1; -; mRNA.
DR RefSeq; NP_001001783.1; NM_001001783.1.
DR AlphaFoldDB; Q6ITC7; -.
DR SMR; Q6ITC7; -.
DR STRING; 9031.ENSGALP00000009821; -.
DR PaxDb; Q6ITC7; -.
DR Ensembl; ENSGALT00000009835; ENSGALP00000009821; ENSGALG00000006096.
DR GeneID; 414782; -.
DR KEGG; gga:414782; -.
DR CTD; 6207; -.
DR VEuPathDB; HostDB:geneid_414782; -.
DR eggNOG; KOG0400; Eukaryota.
DR GeneTree; ENSGT00390000017491; -.
DR HOGENOM; CLU_090139_1_0_1; -.
DR InParanoid; Q6ITC7; -.
DR OMA; EEHPKDM; -.
DR OrthoDB; 1387147at2759; -.
DR PhylomeDB; Q6ITC7; -.
DR TreeFam; TF300190; -.
DR Reactome; R-GGA-72695; Formation of the ternary complex, and subsequently, the 43S complex.
DR Reactome; R-GGA-72702; Ribosomal scanning and start codon recognition.
DR Reactome; R-GGA-975956; Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
DR Reactome; R-GGA-975957; Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).
DR PRO; PR:Q6ITC7; -.
DR Proteomes; UP000000539; Chromosome 5.
DR Bgee; ENSGALG00000006096; Expressed in granulocyte and 12 other tissues.
DR GO; GO:0022627; C:cytosolic small ribosomal subunit; IBA:GO_Central.
DR GO; GO:0005730; C:nucleolus; IBA:GO_Central.
DR GO; GO:0014069; C:postsynaptic density; IEA:Ensembl.
DR GO; GO:0048027; F:mRNA 5'-UTR binding; IEA:Ensembl.
DR GO; GO:0070181; F:small ribosomal subunit rRNA binding; IBA:GO_Central.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0033119; P:negative regulation of RNA splicing; IEA:Ensembl.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR CDD; cd00353; Ribosomal_S15p_S13e; 1.
DR HAMAP; MF_01343_A; Ribosomal_S15_A; 1.
DR InterPro; IPR012606; Ribosomal_S13/S15_N.
DR InterPro; IPR000589; Ribosomal_S15.
DR InterPro; IPR023029; Ribosomal_S15P.
DR InterPro; IPR009068; S15_NS1_RNA-bd.
DR PANTHER; PTHR11885; PTHR11885; 1.
DR Pfam; PF08069; Ribosomal_S13_N; 1.
DR Pfam; PF00312; Ribosomal_S15; 1.
DR SMART; SM01386; Ribosomal_S13_N; 1.
DR SMART; SM01387; Ribosomal_S15; 1.
DR SUPFAM; SSF47060; SSF47060; 1.
DR PROSITE; PS00362; RIBOSOMAL_S15; 1.
PE 2: Evidence at transcript level;
KW Reference proteome; Ribonucleoprotein; Ribosomal protein.
FT INIT_MET 1
FT /note="Removed"
FT /evidence="ECO:0000250"
FT CHAIN 2..151
FT /note="40S ribosomal protein S13"
FT /id="PRO_0000115665"
SQ SEQUENCE 151 AA; 17222 MW; 23F94D38F87B8D53 CRC64;
MGRMHAPGKG LSQSALPYRR SVPTWLKLTS DDVKEQIYKL AKKGLTPSQI GVILRDSHGV
AQVRFVTGNK ILRILKSKGL APDLPEDLYH LIKKAVAVRK HLERNRKDKD AKFRLILIES
RIHRLARYYK TKRVLPPNWK YESSTASALV A