RS13_HALMA
ID RS13_HALMA Reviewed; 177 AA.
AC Q00861; Q5V5R2;
DT 01-APR-1993, integrated into UniProtKB/Swiss-Prot.
DT 01-APR-1993, sequence version 1.
DT 25-MAY-2022, entry version 104.
DE RecName: Full=30S ribosomal protein S13 {ECO:0000255|HAMAP-Rule:MF_01315};
DE AltName: Full=HmaS13;
GN Name=rps13 {ECO:0000255|HAMAP-Rule:MF_01315}; OrderedLocusNames=rrnAC0058;
OS Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM
OS B-1809) (Halobacterium marismortui).
OC Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Halobacteriales;
OC Haloarculaceae; Haloarcula.
OX NCBI_TaxID=272569;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=1376318; DOI=10.1016/s0021-9258(19)49814-1;
RA Scholzen T., Arndt E.;
RT "The alpha-operon equivalent genome region in the extreme halophilic
RT archaebacterium Haloarcula (Halobacterium) marismortui.";
RL J. Biol. Chem. 267:12123-12130(1992).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809;
RX PubMed=15520287; DOI=10.1101/gr.2700304;
RA Baliga N.S., Bonneau R., Facciotti M.T., Pan M., Glusman G., Deutsch E.W.,
RA Shannon P., Chiu Y., Weng R.S., Gan R.R., Hung P., Date S.V., Marcotte E.,
RA Hood L., Ng W.V.;
RT "Genome sequence of Haloarcula marismortui: a halophilic archaeon from the
RT Dead Sea.";
RL Genome Res. 14:2221-2234(2004).
CC -!- FUNCTION: Located at the top of the head of the 30S subunit, it
CC contacts several helices of the 16S rRNA. In the 70S ribosome it
CC contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit
CC (bridge B1b), connecting the 2 subunits; these bridges are implicated
CC in subunit movement. {ECO:0000255|HAMAP-Rule:MF_01315}.
CC -!- SUBUNIT: Part of the 30S ribosomal subunit. Forms a loose heterodimer
CC with protein S19. Forms two bridges to the 50S subunit in the 70S
CC ribosome. {ECO:0000255|HAMAP-Rule:MF_01315}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uS13 family.
CC {ECO:0000255|HAMAP-Rule:MF_01315}.
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DR EMBL; M87833; AAA73209.1; -; Genomic_DNA.
DR EMBL; AY596297; AAV45140.1; -; Genomic_DNA.
DR PIR; A44126; A44126.
DR RefSeq; WP_004963348.1; NZ_CP039138.1.
DR AlphaFoldDB; Q00861; -.
DR SMR; Q00861; -.
DR STRING; 272569.rrnAC0058; -.
DR EnsemblBacteria; AAV45140; AAV45140; rrnAC0058.
DR GeneID; 40154374; -.
DR GeneID; 64823174; -.
DR KEGG; hma:rrnAC0058; -.
DR PATRIC; fig|272569.17.peg.868; -.
DR eggNOG; arCOG01722; Archaea.
DR HOGENOM; CLU_103849_0_0_2; -.
DR OMA; IRAYRGI; -.
DR Proteomes; UP000001169; Chromosome I.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR Gene3D; 4.10.910.10; -; 1.
DR HAMAP; MF_01315; Ribosomal_S13_S18; 1.
DR InterPro; IPR027437; 30s_Rbsml_prot_S13_C.
DR InterPro; IPR001892; Ribosomal_S13.
DR InterPro; IPR010979; Ribosomal_S13-like_H2TH.
DR InterPro; IPR019977; Ribosomal_S13_archaeal.
DR InterPro; IPR018269; Ribosomal_S13_CS.
DR Pfam; PF00416; Ribosomal_S13; 1.
DR PIRSF; PIRSF002134; Ribosomal_S13; 1.
DR SUPFAM; SSF46946; SSF46946; 1.
DR TIGRFAMs; TIGR03629; uS13_arch; 1.
DR PROSITE; PS00646; RIBOSOMAL_S13_1; 1.
DR PROSITE; PS50159; RIBOSOMAL_S13_2; 1.
PE 3: Inferred from homology;
KW Reference proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding;
KW rRNA-binding.
FT CHAIN 1..177
FT /note="30S ribosomal protein S13"
FT /id="PRO_0000132178"
FT REGION 132..177
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 177 AA; 20050 MW; C101FA895ABD5289 CRC64;
MSAEDPNAGE DADAEEEEDI RYFVRIGQTD LDGTKSVERA LTELNGIGHR AARIIAQKAD
VDRRAVFGKL DDDVIERVVE RVENFADDVP EWMTNHQKDY FTGETTHETG NDLQLTRRQD
INRMKMIDSY RGVRHKRGQK VRGQRTKSTG RTEGTIGVNV EAIKEEQAED AAAEDDE