RS13_HALSA
ID RS13_HALSA Reviewed; 171 AA.
AC Q9V2W4;
DT 21-FEB-2001, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 25-MAY-2022, entry version 116.
DE RecName: Full=30S ribosomal protein S13 {ECO:0000255|HAMAP-Rule:MF_01315};
DE AltName: Full=HS13;
GN Name=rps13 {ECO:0000255|HAMAP-Rule:MF_01315}; OrderedLocusNames=VNG_1132G;
OS Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
OS (Halobacterium halobium).
OC Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Halobacteriales;
OC Halobacteriaceae; Halobacterium.
OX NCBI_TaxID=64091;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=R1 / S9;
RX PubMed=10527834; DOI=10.1006/bbrc.1999.1480;
RA Sano K., Taguchi A., Furumoto H., Uda T., Itoh T.;
RT "Cloning, sequencing, and characterization of ribosomal protein and RNA
RT polymerase genes from the region analogous to the alpha-operon of
RT Escherichia coli in halophilic archaea, Halobacterium halobium.";
RL Biochem. Biophys. Res. Commun. 264:24-28(1999).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700922 / JCM 11081 / NRC-1;
RX PubMed=11016950; DOI=10.1073/pnas.190337797;
RA Ng W.V., Kennedy S.P., Mahairas G.G., Berquist B., Pan M., Shukla H.D.,
RA Lasky S.R., Baliga N.S., Thorsson V., Sbrogna J., Swartzell S., Weir D.,
RA Hall J., Dahl T.A., Welti R., Goo Y.A., Leithauser B., Keller K., Cruz R.,
RA Danson M.J., Hough D.W., Maddocks D.G., Jablonski P.E., Krebs M.P.,
RA Angevine C.M., Dale H., Isenbarger T.A., Peck R.F., Pohlschroder M.,
RA Spudich J.L., Jung K.-H., Alam M., Freitas T., Hou S., Daniels C.J.,
RA Dennis P.P., Omer A.D., Ebhardt H., Lowe T.M., Liang P., Riley M., Hood L.,
RA DasSarma S.;
RT "Genome sequence of Halobacterium species NRC-1.";
RL Proc. Natl. Acad. Sci. U.S.A. 97:12176-12181(2000).
CC -!- FUNCTION: Located at the top of the head of the 30S subunit, it
CC contacts several helices of the 16S rRNA. In the 70S ribosome it
CC contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit
CC (bridge B1b), connecting the 2 subunits; these bridges are implicated
CC in subunit movement. {ECO:0000255|HAMAP-Rule:MF_01315}.
CC -!- SUBUNIT: Part of the 30S ribosomal subunit. Forms a loose heterodimer
CC with protein S19. Forms two bridges to the 50S subunit in the 70S
CC ribosome. {ECO:0000255|HAMAP-Rule:MF_01315}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uS13 family.
CC {ECO:0000255|HAMAP-Rule:MF_01315}.
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DR EMBL; AB030282; BAA85895.1; -; Genomic_DNA.
DR EMBL; AE004437; AAG19517.1; -; Genomic_DNA.
DR PIR; A84269; A84269.
DR PIR; T43937; T43937.
DR RefSeq; WP_010902812.1; NC_002607.1.
DR AlphaFoldDB; Q9V2W4; -.
DR SMR; Q9V2W4; -.
DR STRING; 64091.VNG_1132G; -.
DR PaxDb; Q9V2W4; -.
DR PRIDE; Q9V2W4; -.
DR EnsemblBacteria; AAG19517; AAG19517; VNG_1132G.
DR GeneID; 5954417; -.
DR GeneID; 62886651; -.
DR KEGG; hal:VNG_1132G; -.
DR PATRIC; fig|64091.14.peg.863; -.
DR HOGENOM; CLU_103849_0_0_2; -.
DR InParanoid; Q9V2W4; -.
DR OMA; IRAYRGI; -.
DR OrthoDB; 84219at2157; -.
DR PhylomeDB; Q9V2W4; -.
DR Proteomes; UP000000554; Chromosome.
DR GO; GO:0005829; C:cytosol; IBA:GO_Central.
DR GO; GO:0015935; C:small ribosomal subunit; IBA:GO_Central.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR Gene3D; 4.10.910.10; -; 1.
DR HAMAP; MF_01315; Ribosomal_S13_S18; 1.
DR InterPro; IPR027437; 30s_Rbsml_prot_S13_C.
DR InterPro; IPR001892; Ribosomal_S13.
DR InterPro; IPR010979; Ribosomal_S13-like_H2TH.
DR InterPro; IPR019977; Ribosomal_S13_archaeal.
DR InterPro; IPR018269; Ribosomal_S13_CS.
DR Pfam; PF00416; Ribosomal_S13; 1.
DR PIRSF; PIRSF002134; Ribosomal_S13; 1.
DR SUPFAM; SSF46946; SSF46946; 1.
DR TIGRFAMs; TIGR03629; uS13_arch; 1.
DR PROSITE; PS00646; RIBOSOMAL_S13_1; 1.
DR PROSITE; PS50159; RIBOSOMAL_S13_2; 1.
PE 3: Inferred from homology;
KW Reference proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding;
KW rRNA-binding.
FT CHAIN 1..171
FT /note="30S ribosomal protein S13"
FT /id="PRO_0000132179"
FT REGION 128..171
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 171 AA; 18918 MW; E00F0015E8A72AF7 CRC64;
MSSEEQEDVD EDIQYFVRIG QTDLDGTKTV ERALAELGGV GRRVARIVAD EAGVDRTATM
GGLEDDAIES VTDAVDSFTE HAPAWLANRQ NDFYTGENQH ITGTDVELTR DQDINRMRMI
RSYKGIRHER GQKVRGQRTK STGRTEGTIG VNVEAIKEEQ AEDDAADGGE E