ID   RS13_PYRAB              Reviewed;         148 AA.
AC   Q9V1A0; G8ZGN7;
DT   27-JUN-2003, integrated into UniProtKB/Swiss-Prot.
DT   01-MAY-2000, sequence version 1.
DT   25-MAY-2022, entry version 106.
DE   RecName: Full=30S ribosomal protein S13 {ECO:0000255|HAMAP-Rule:MF_01315};
GN   Name=rps13 {ECO:0000255|HAMAP-Rule:MF_01315}; OrderedLocusNames=PYRAB05270;
GN   ORFNames=PAB0360;
OS   Pyrococcus abyssi (strain GE5 / Orsay).
OC   Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae;
OC   Pyrococcus.
OX   NCBI_TaxID=272844;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=GE5 / Orsay;
RX   PubMed=12622808; DOI=10.1046/j.1365-2958.2003.03381.x;
RA   Cohen G.N., Barbe V., Flament D., Galperin M., Heilig R., Lecompte O.,
RA   Poch O., Prieur D., Querellou J., Ripp R., Thierry J.-C., Van der Oost J.,
RA   Weissenbach J., Zivanovic Y., Forterre P.;
RT   "An integrated analysis of the genome of the hyperthermophilic archaeon
RT   Pyrococcus abyssi.";
RL   Mol. Microbiol. 47:1495-1512(2003).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=GE5 / Orsay;
RX   PubMed=22057919; DOI=10.1007/s00284-011-0035-x;
RA   Gao J., Wang J.;
RT   "Re-annotation of two hyperthermophilic archaea Pyrococcus abyssi GE5 and
RT   Pyrococcus furiosus DSM 3638.";
RL   Curr. Microbiol. 64:118-129(2012).
CC   -!- FUNCTION: Located at the top of the head of the 30S subunit, it
CC       contacts several helices of the 16S rRNA. In the 70S ribosome it
CC       contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit
CC       (bridge B1b), connecting the 2 subunits; these bridges are implicated
CC       in subunit movement. {ECO:0000255|HAMAP-Rule:MF_01315}.
CC   -!- SUBUNIT: Part of the 30S ribosomal subunit. Forms a loose heterodimer
CC       with protein S19. Forms two bridges to the 50S subunit in the 70S
CC       ribosome. {ECO:0000255|HAMAP-Rule:MF_01315}.
CC   -!- SIMILARITY: Belongs to the universal ribosomal protein uS13 family.
CC       {ECO:0000255|HAMAP-Rule:MF_01315}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; AJ248284; CAB49449.1; -; Genomic_DNA.
DR   EMBL; HE613800; CCE69916.1; -; Genomic_DNA.
DR   PIR; B75171; B75171.
DR   RefSeq; WP_010867651.1; NC_000868.1.
DR   PDB; 6SW9; EM; 4.20 A; O=1-148.
DR   PDB; 6SWC; EM; 3.30 A; O=1-148.
DR   PDB; 6SWE; EM; 3.10 A; O=1-148.
DR   PDBsum; 6SW9; -.
DR   PDBsum; 6SWC; -.
DR   PDBsum; 6SWE; -.
DR   AlphaFoldDB; Q9V1A0; -.
DR   SMR; Q9V1A0; -.
DR   STRING; 272844.PAB0360; -.
DR   EnsemblBacteria; CAB49449; CAB49449; PAB0360.
DR   GeneID; 1495429; -.
DR   KEGG; pab:PAB0360; -.
DR   PATRIC; fig|272844.11.peg.562; -.
DR   eggNOG; arCOG01722; Archaea.
DR   HOGENOM; CLU_103849_0_0_2; -.
DR   OMA; IRAYRGI; -.
DR   OrthoDB; 84219at2157; -.
DR   PhylomeDB; Q9V1A0; -.
DR   Proteomes; UP000000810; Chromosome.
DR   Proteomes; UP000009139; Chromosome.
DR   GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR   GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR   Gene3D; 4.10.910.10; -; 1.
DR   HAMAP; MF_01315; Ribosomal_S13_S18; 1.
DR   InterPro; IPR027437; 30s_Rbsml_prot_S13_C.
DR   InterPro; IPR001892; Ribosomal_S13.
DR   InterPro; IPR010979; Ribosomal_S13-like_H2TH.
DR   InterPro; IPR019977; Ribosomal_S13_archaeal.
DR   InterPro; IPR018269; Ribosomal_S13_CS.
DR   Pfam; PF00416; Ribosomal_S13; 1.
DR   PIRSF; PIRSF002134; Ribosomal_S13; 1.
DR   SUPFAM; SSF46946; SSF46946; 1.
DR   TIGRFAMs; TIGR03629; uS13_arch; 1.
DR   PROSITE; PS00646; RIBOSOMAL_S13_1; 1.
DR   PROSITE; PS50159; RIBOSOMAL_S13_2; 1.
PE   1: Evidence at protein level;
KW   3D-structure; Ribonucleoprotein; Ribosomal protein; RNA-binding;
KW   rRNA-binding.
FT   CHAIN           1..148
FT                   /note="30S ribosomal protein S13"
FT                   /id="PRO_0000132185"
FT   STRAND          6..9
FT                   /evidence="ECO:0007829|PDB:6SWE"
FT   STRAND          11..20
FT                   /evidence="ECO:0007829|PDB:6SWE"
FT   HELIX           21..24
FT                   /evidence="ECO:0007829|PDB:6SWE"
FT   HELIX           25..27
FT                   /evidence="ECO:0007829|PDB:6SWC"
FT   HELIX           33..43
FT                   /evidence="ECO:0007829|PDB:6SWE"
FT   STRAND          47..50
FT                   /evidence="ECO:0007829|PDB:6SWC"
FT   HELIX           51..53
FT                   /evidence="ECO:0007829|PDB:6SWE"
FT   HELIX           56..67
FT                   /evidence="ECO:0007829|PDB:6SWE"
FT   HELIX           70..72
FT                   /evidence="ECO:0007829|PDB:6SWE"
FT   STRAND          76..83
FT                   /evidence="ECO:0007829|PDB:6SWE"
FT   STRAND          85..88
FT                   /evidence="ECO:0007829|PDB:6SWE"
FT   HELIX           95..111
FT                   /evidence="ECO:0007829|PDB:6SWE"
FT   HELIX           115..122
FT                   /evidence="ECO:0007829|PDB:6SWE"
FT   STRAND          132..134
FT                   /evidence="ECO:0007829|PDB:6SWE"
SQ   SEQUENCE   148 AA;  16959 MW;  E40AB97560689F25 CRC64;
     MADFRHIVRV AGVDLDGNKQ LRWALTAIKG VGINFATMVC RVAGLDPFMK AGYLTDEQVK
     KIEEILQDPV AHGIPRWAVN RPKDYETGRD LHLITAKLDM AIREDIMRLR RIRAYRGIRH
     ELGLPVRGQR TRSNFRRGQT VGVSRKKK