RS13_PYRFU
ID RS13_PYRFU Reviewed; 148 AA.
AC Q8U0E2;
DT 27-JUN-2003, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2002, sequence version 1.
DT 03-AUG-2022, entry version 96.
DE RecName: Full=30S ribosomal protein S13 {ECO:0000255|HAMAP-Rule:MF_01315};
DE AltName: Full=Small ribosomal subunit protein uS13;
GN Name=rps13 {ECO:0000255|HAMAP-Rule:MF_01315}; OrderedLocusNames=PF1650;
OS Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1).
OC Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae;
OC Pyrococcus.
OX NCBI_TaxID=186497;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 43587 / DSM 3638 / JCM 8422 / Vc1;
RX PubMed=10430560; DOI=10.1093/genetics/152.4.1299;
RA Maeder D.L., Weiss R.B., Dunn D.M., Cherry J.L., Gonzalez J.M.,
RA DiRuggiero J., Robb F.T.;
RT "Divergence of the hyperthermophilic archaea Pyrococcus furiosus and P.
RT horikoshii inferred from complete genomic sequences.";
RL Genetics 152:1299-1305(1999).
RN [2] {ECO:0007744|PDB:4V6U}
RP STRUCTURE BY ELECTRON MICROSCOPY (6.60 ANGSTROMS) IN THE 70S RIBOSOME, AND
RP SUBUNIT.
RX PubMed=23222135; DOI=10.1093/nar/gks1259;
RA Armache J.P., Anger A.M., Marquez V., Franckenberg S., Frohlich T.,
RA Villa E., Berninghausen O., Thomm M., Arnold G.J., Beckmann R.,
RA Wilson D.N.;
RT "Promiscuous behaviour of archaeal ribosomal proteins: implications for
RT eukaryotic ribosome evolution.";
RL Nucleic Acids Res. 41:1284-1293(2013).
CC -!- FUNCTION: Located at the top of the head of the 30S subunit, it
CC contacts several helices of the 16S rRNA. In the 70S ribosome it
CC contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit
CC (bridge B1b), connecting the 2 subunits; these bridges are implicated
CC in subunit movement. {ECO:0000255|HAMAP-Rule:MF_01315}.
CC -!- SUBUNIT: Part of the 30S ribosomal subunit (PubMed:23222135). Forms a
CC loose heterodimer with protein S19 (By similarity). Forms two bridges
CC to the 50S subunit in the 70S ribosome (By similarity).
CC {ECO:0000255|HAMAP-Rule:MF_01315, ECO:0000269|PubMed:23222135}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uS13 family.
CC {ECO:0000255|HAMAP-Rule:MF_01315}.
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DR EMBL; AE009950; AAL81774.1; -; Genomic_DNA.
DR RefSeq; WP_011012796.1; NZ_CP023154.1.
DR PDB; 4V4N; EM; 9.00 A; O=1-148.
DR PDB; 4V6U; EM; 6.60 A; AO=1-148.
DR PDB; 5JB3; EM; 5.34 A; O=1-148.
DR PDB; 5JBH; EM; 5.34 A; O=1-148.
DR PDBsum; 4V4N; -.
DR PDBsum; 4V6U; -.
DR PDBsum; 5JB3; -.
DR PDBsum; 5JBH; -.
DR AlphaFoldDB; Q8U0E2; -.
DR SMR; Q8U0E2; -.
DR STRING; 186497.PF1650; -.
DR PRIDE; Q8U0E2; -.
DR EnsemblBacteria; AAL81774; AAL81774; PF1650.
DR GeneID; 41713477; -.
DR KEGG; pfu:PF1650; -.
DR PATRIC; fig|186497.12.peg.1716; -.
DR eggNOG; arCOG01722; Archaea.
DR HOGENOM; CLU_103849_0_0_2; -.
DR OMA; IRAYRGI; -.
DR OrthoDB; 84219at2157; -.
DR PhylomeDB; Q8U0E2; -.
DR Proteomes; UP000001013; Chromosome.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR Gene3D; 4.10.910.10; -; 1.
DR HAMAP; MF_01315; Ribosomal_S13_S18; 1.
DR InterPro; IPR027437; 30s_Rbsml_prot_S13_C.
DR InterPro; IPR001892; Ribosomal_S13.
DR InterPro; IPR010979; Ribosomal_S13-like_H2TH.
DR InterPro; IPR019977; Ribosomal_S13_archaeal.
DR InterPro; IPR018269; Ribosomal_S13_CS.
DR Pfam; PF00416; Ribosomal_S13; 1.
DR PIRSF; PIRSF002134; Ribosomal_S13; 1.
DR SUPFAM; SSF46946; SSF46946; 1.
DR TIGRFAMs; TIGR03629; uS13_arch; 1.
DR PROSITE; PS00646; RIBOSOMAL_S13_1; 1.
DR PROSITE; PS50159; RIBOSOMAL_S13_2; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Reference proteome; Ribonucleoprotein; Ribosomal protein;
KW RNA-binding; rRNA-binding.
FT CHAIN 1..148
FT /note="30S ribosomal protein S13"
FT /id="PRO_0000132187"
SQ SEQUENCE 148 AA; 16915 MW; 14BADE1A10AA344E CRC64;
MANFRHIVRV AGVDLDGNKQ LRWALTAIKG IGINFATMVC RVAGLDPFMK AGYLTDEQVK
KIEEILADPV AHGIPRWAVN RPKDYETGRD LHLITAKLDM AIREDIMRLR RIRAYRGIRH
ELGLPVRGQR TRSNFRRGQT VGVSRKKK