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ABC3D_HUMAN
ID   ABC3D_HUMAN             Reviewed;         386 AA.
AC   Q96AK3; Q5JZ91; Q7Z2N2; Q7Z2N5; Q7Z2N6;
DT   29-MAR-2004, integrated into UniProtKB/Swiss-Prot.
DT   01-DEC-2001, sequence version 1.
DT   03-AUG-2022, entry version 147.
DE   RecName: Full=DNA dC->dU-editing enzyme APOBEC-3D;
DE            Short=A3D;
DE            Short=A3DE {ECO:0000303|PubMed:23001005};
DE            EC=3.5.4.38;
GN   Name=APOBEC3D {ECO:0000312|HGNC:HGNC:17354};
GN   Synonyms=APOBEC3DE {ECO:0000312|HGNC:HGNC:17354};
OS   Homo sapiens (Human).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
OX   NCBI_TaxID=9606;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=10591208; DOI=10.1038/990031;
RA   Dunham I., Hunt A.R., Collins J.E., Bruskiewich R., Beare D.M., Clamp M.,
RA   Smink L.J., Ainscough R., Almeida J.P., Babbage A.K., Bagguley C.,
RA   Bailey J., Barlow K.F., Bates K.N., Beasley O.P., Bird C.P., Blakey S.E.,
RA   Bridgeman A.M., Buck D., Burgess J., Burrill W.D., Burton J., Carder C.,
RA   Carter N.P., Chen Y., Clark G., Clegg S.M., Cobley V.E., Cole C.G.,
RA   Collier R.E., Connor R., Conroy D., Corby N.R., Coville G.J., Cox A.V.,
RA   Davis J., Dawson E., Dhami P.D., Dockree C., Dodsworth S.J., Durbin R.M.,
RA   Ellington A.G., Evans K.L., Fey J.M., Fleming K., French L., Garner A.A.,
RA   Gilbert J.G.R., Goward M.E., Grafham D.V., Griffiths M.N.D., Hall C.,
RA   Hall R.E., Hall-Tamlyn G., Heathcott R.W., Ho S., Holmes S., Hunt S.E.,
RA   Jones M.C., Kershaw J., Kimberley A.M., King A., Laird G.K., Langford C.F.,
RA   Leversha M.A., Lloyd C., Lloyd D.M., Martyn I.D., Mashreghi-Mohammadi M.,
RA   Matthews L.H., Mccann O.T., Mcclay J., Mclaren S., McMurray A.A.,
RA   Milne S.A., Mortimore B.J., Odell C.N., Pavitt R., Pearce A.V., Pearson D.,
RA   Phillimore B.J.C.T., Phillips S.H., Plumb R.W., Ramsay H., Ramsey Y.,
RA   Rogers L., Ross M.T., Scott C.E., Sehra H.K., Skuce C.D., Smalley S.,
RA   Smith M.L., Soderlund C., Spragon L., Steward C.A., Sulston J.E.,
RA   Swann R.M., Vaudin M., Wall M., Wallis J.M., Whiteley M.N., Willey D.L.,
RA   Williams L., Williams S.A., Williamson H., Wilmer T.E., Wilming L.,
RA   Wright C.L., Hubbard T., Bentley D.R., Beck S., Rogers J., Shimizu N.,
RA   Minoshima S., Kawasaki K., Sasaki T., Asakawa S., Kudoh J., Shintani A.,
RA   Shibuya K., Yoshizaki Y., Aoki N., Mitsuyama S., Roe B.A., Chen F., Chu L.,
RA   Crabtree J., Deschamps S., Do A., Do T., Dorman A., Fang F., Fu Y., Hu P.,
RA   Hua A., Kenton S., Lai H., Lao H.I., Lewis J., Lewis S., Lin S.-P., Loh P.,
RA   Malaj E., Nguyen T., Pan H., Phan S., Qi S., Qian Y., Ray L., Ren Q.,
RA   Shaull S., Sloan D., Song L., Wang Q., Wang Y., Wang Z., White J.,
RA   Willingham D., Wu H., Yao Z., Zhan M., Zhang G., Chissoe S., Murray J.,
RA   Miller N., Minx P., Fulton R., Johnson D., Bemis G., Bentley D.,
RA   Bradshaw H., Bourne S., Cordes M., Du Z., Fulton L., Goela D., Graves T.,
RA   Hawkins J., Hinds K., Kemp K., Latreille P., Layman D., Ozersky P.,
RA   Rohlfing T., Scheet P., Walker C., Wamsley A., Wohldmann P., Pepin K.,
RA   Nelson J., Korf I., Bedell J.A., Hillier L.W., Mardis E., Waterston R.,
RA   Wilson R., Emanuel B.S., Shaikh T., Kurahashi H., Saitta S., Budarf M.L.,
RA   McDermid H.E., Johnson A., Wong A.C.C., Morrow B.E., Edelmann L., Kim U.J.,
RA   Shizuya H., Simon M.I., Dumanski J.P., Peyrard M., Kedra D., Seroussi E.,
RA   Fransson I., Tapia I., Bruder C.E., O'Brien K.P., Wilkinson P.,
RA   Bodenteich A., Hartman K., Hu X., Khan A.S., Lane L., Tilahun Y.,
RA   Wright H.;
RT   "The DNA sequence of human chromosome 22.";
RL   Nature 402:489-495(1999).
RN   [2]
RP   GENE FAMILY ORGANIZATION.
RX   PubMed=11863358; DOI=10.1006/geno.2002.6718;
RA   Jarmuz A., Chester A., Bayliss J., Gisbourne J., Dunham I., Scott J.,
RA   Navaratnam N.;
RT   "An anthropoid-specific locus of orphan C to U RNA-editing enzymes on
RT   chromosome 22.";
RL   Genomics 79:285-296(2002).
RN   [3]
RP   REVIEW ON APOBEC FAMILIES.
RX   PubMed=12683974; DOI=10.1016/s0168-9525(03)00054-4;
RA   Wedekind J.E., Dance G.S.C., Sowden M.P., Smith H.C.;
RT   "Messenger RNA editing in mammals: new members of the APOBEC family seeking
RT   roles in the family business.";
RL   Trends Genet. 19:207-216(2003).
RN   [4]
RP   FUNCTION IN HIV-1 INFECTIVITY.
RX   PubMed=12859895; DOI=10.1016/s0092-8674(03)00515-4;
RA   Mariani R., Chen D., Schroefelbauer B., Navarro F., Koenig R., Bollman B.,
RA   Muenk C., Nymark-McMahon H., Landau N.R.;
RT   "Species-specific exclusion of APOBEC3G from HIV-1 virions by Vif.";
RL   Cell 114:21-31(2003).
RN   [5]
RP   FUNCTION, MUTAGENESIS OF ASP-140, INTERACTION WITH HIV-1 VIF (MICROBIAL
RP   INFECTION), AND INTERACTION WITH APOBEC3F AND APOBEC3G.
RX   PubMed=16920826; DOI=10.1128/jvi.01123-06;
RA   Dang Y., Wang X., Esselman W.J., Zheng Y.-H.;
RT   "Identification of APOBEC3DE as another antiretroviral factor from the
RT   human APOBEC family.";
RL   J. Virol. 80:10522-10533(2006).
RN   [6]
RP   REVIEW.
RX   PubMed=18304004; DOI=10.1146/annurev.immunol.26.021607.090350;
RA   Chiu Y.L., Greene W.C.;
RT   "The APOBEC3 cytidine deaminases: an innate defensive network opposing
RT   exogenous retroviruses and endogenous retroelements.";
RL   Annu. Rev. Immunol. 26:317-353(2008).
RN   [7]
RP   FUNCTION IN RETROTRANSPOSITION.
RX   PubMed=20062055; DOI=10.1038/nsmb.1744;
RA   Stenglein M.D., Burns M.B., Li M., Lengyel J., Harris R.S.;
RT   "APOBEC3 proteins mediate the clearance of foreign DNA from human cells.";
RL   Nat. Struct. Mol. Biol. 17:222-229(2010).
RN   [8]
RP   TISSUE SPECIFICITY.
RX   PubMed=20308164; DOI=10.1093/nar/gkq174;
RA   Refsland E.W., Stenglein M.D., Shindo K., Albin J.S., Brown W.L.,
RA   Harris R.S.;
RT   "Quantitative profiling of the full APOBEC3 mRNA repertoire in lymphocytes
RT   and tissues: implications for HIV-1 restriction.";
RL   Nucleic Acids Res. 38:4274-4284(2010).
RN   [9]
RP   FUNCTION IN HIV-1 RESTRICTION, SUBCELLULAR LOCATION, AND ACTIVITY
RP   REGULATION.
RX   PubMed=21835787; DOI=10.1128/jvi.05238-11;
RA   Hultquist J.F., Lengyel J.A., Refsland E.W., LaRue R.S., Lackey L.,
RA   Brown W.L., Harris R.S.;
RT   "Human and rhesus APOBEC3D, APOBEC3F, APOBEC3G, and APOBEC3H demonstrate a
RT   conserved capacity to restrict Vif-deficient HIV-1.";
RL   J. Virol. 85:11220-11234(2011).
RN   [10]
RP   REVIEW.
RX   PubMed=22912627; DOI=10.3389/fmicb.2012.00275;
RA   Arias J.F., Koyama T., Kinomoto M., Tokunaga K.;
RT   "Retroelements versus APOBEC3 family members: No great escape from the
RT   magnificent seven.";
RL   Front. Microbiol. 3:275-275(2012).
RN   [11]
RP   SUBCELLULAR LOCATION.
RX   PubMed=22915799; DOI=10.1128/jvi.00595-12;
RA   Phalora P.K., Sherer N.M., Wolinsky S.M., Swanson C.M., Malim M.H.;
RT   "HIV-1 replication and APOBEC3 antiviral activity are not regulated by P
RT   bodies.";
RL   J. Virol. 86:11712-11724(2012).
RN   [12]
RP   INTERACTION WITH HIV-1 VIF (MICROBIAL INFECTION), AND MUTAGENESIS OF
RP   GLU-264; LEU-268; PHE-271; CYS-272; 275-ILE-LEU-276; SER-277; TYR-282;
RP   GLU-302; PHE-303; HIS-307 AND GLU-337.
RX   PubMed=23001005; DOI=10.1038/nsmb.2378;
RA   Kitamura S., Ode H., Nakashima M., Imahashi M., Naganawa Y., Kurosawa T.,
RA   Yokomaku Y., Yamane T., Watanabe N., Suzuki A., Sugiura W., Iwatani Y.;
RT   "The APOBEC3C crystal structure and the interface for HIV-1 Vif binding.";
RL   Nat. Struct. Mol. Biol. 19:1005-1010(2012).
RN   [13]
RP   FUNCTION IN HIV-1 RESTRICTION.
RX   PubMed=22807680; DOI=10.1371/journal.ppat.1002800;
RA   Refsland E.W., Hultquist J.F., Harris R.S.;
RT   "Endogenous origins of HIV-1 G-to-A hypermutation and restriction in the
RT   nonpermissive T cell line CEM2n.";
RL   PLoS Pathog. 8:E1002800-E1002800(2012).
RN   [14]
RP   REVIEW.
RX   PubMed=22001110; DOI=10.1016/j.semcdb.2011.10.004;
RA   Smith H.C., Bennett R.P., Kizilyer A., McDougall W.M., Prohaska K.M.;
RT   "Functions and regulation of the APOBEC family of proteins.";
RL   Semin. Cell Dev. Biol. 23:258-268(2012).
RN   [15]
RP   FUNCTION, SUBCELLULAR LOCATION, AND INTERACTION WITH L1RE1.
RX   PubMed=27428332; DOI=10.1371/journal.pone.0157220;
RA   Liang W., Xu J., Yuan W., Song X., Zhang J., Wei W., Yu X.F., Yang Y.;
RT   "APOBEC3DE Inhibits LINE-1 Retrotransposition by Interacting with ORF1p and
RT   Influencing LINE Reverse Transcriptase Activity.";
RL   PLoS ONE 11:e0157220-e0157220(2016).
RN   [16]
RP   FUNCTION (MICROBIAL INFECTION), SUBCELLULAR LOCATION, AND INTERACTION WITH
RP   APOBEC3F AND APOBEC3G.
RX   PubMed=27289067; DOI=10.1016/j.jmb.2016.05.022;
RA   Bouzidi M.S., Caval V., Suspene R., Hallez C., Pineau P., Wain-Hobson S.,
RA   Vartanian J.P.;
RT   "APOBEC3DE Antagonizes Hepatitis B Virus Restriction Factors APOBEC3F and
RT   APOBEC3G.";
RL   J. Mol. Biol. 428:3514-3528(2016).
RN   [17]
RP   FUNCTION IN HIV-1 RESTRICTION.
RX   PubMed=23097438; DOI=10.1128/jvi.00676-12;
RA   Chaipan C., Smith J.L., Hu W.S., Pathak V.K.;
RT   "APOBEC3G restricts HIV-1 to a greater extent than APOBEC3F and APOBEC3DE
RT   in human primary CD4+ t cells and macrophages.";
RL   J. Virol. 87:444-453(2013).
RN   [18]
RP   FUNCTION IN HIV-1 RESTRICTION.
RX   PubMed=23152537; DOI=10.1128/jvi.02587-12;
RA   Gillick K., Pollpeter D., Phalora P., Kim E.Y., Wolinsky S.M., Malim M.H.;
RT   "The suppression of HIV-1 infection by APOBEC3 proteins in primary human
RT   CD4+ T cells is associated with the inhibition of processive reverse
RT   transcription as well as excessive cytidine deamination.";
RL   J. Virol. 87:1508-1517(2013).
CC   -!- FUNCTION: DNA deaminase (cytidine deaminase) which acts as an inhibitor
CC       of retrovirus replication and retrotransposon mobility via deaminase-
CC       dependent and -independent mechanisms (PubMed:16920826,
CC       PubMed:20062055, PubMed:21835787). Exhibits antiviral activity against
CC       HIV-1. After the penetration of retroviral nucleocapsids into target
CC       cells of infection and the initiation of reverse transcription, it can
CC       induce the conversion of cytosine to uracil in the minus-sense single-
CC       strand viral DNA, leading to G-to-A hypermutations in the subsequent
CC       plus-strand viral DNA (PubMed:16920826). The resultant detrimental
CC       levels of mutations in the proviral genome, along with a deamination-
CC       independent mechanism that works prior to the proviral integration,
CC       together exert efficient antiretroviral effects in infected target
CC       cells. Selectively targets single-stranded DNA and does not deaminate
CC       double-stranded DNA or single- or double-stranded RNA. Inhibits also
CC       the mobility of LTR and non-LTR retrotransposons (PubMed:27428332).
CC       {ECO:0000269|PubMed:12859895, ECO:0000269|PubMed:16920826,
CC       ECO:0000269|PubMed:20062055, ECO:0000269|PubMed:21835787,
CC       ECO:0000269|PubMed:22807680, ECO:0000269|PubMed:23097438,
CC       ECO:0000269|PubMed:23152537}.
CC   -!- FUNCTION: (Microbial infection) Enhances hepatitis B virus/HBV
CC       replication by excluding restriction factors APOBEC3F and APOBEC3G from
CC       HBV capsids. {ECO:0000269|PubMed:27289067}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=a 2'-deoxycytidine in single-stranded DNA + H(+) + H2O = a 2'-
CC         deoxyuridine in single-stranded DNA + NH4(+); Xref=Rhea:RHEA:50948,
CC         Rhea:RHEA-COMP:12846, Rhea:RHEA-COMP:12847, ChEBI:CHEBI:15377,
CC         ChEBI:CHEBI:15378, ChEBI:CHEBI:28938, ChEBI:CHEBI:85452,
CC         ChEBI:CHEBI:133902; EC=3.5.4.38;
CC   -!- COFACTOR:
CC       Name=Zn(2+); Xref=ChEBI:CHEBI:29105; Evidence={ECO:0000250};
CC   -!- ACTIVITY REGULATION: (Microbial infection) Antiviral activity is
CC       neutralized by the HIV-1 virion infectivity factor (Vif), that prevents
CC       its incorporation into progeny virions by both inhibiting its
CC       translation and/or by inducing its ubiquitination and subsequent
CC       degradation by the 26S proteasome. {ECO:0000269|PubMed:21835787}.
CC   -!- SUBUNIT: Can form homo- and heterodimers with APOBEC3F and APOBEC3G
CC       (PubMed:16920826, PubMed:27289067). Interacts with L1RE1; this
CC       interaction inhibits LINE-1 retrotransposition (PubMed:27428332).
CC       {ECO:0000269|PubMed:16920826, ECO:0000269|PubMed:27289067,
CC       ECO:0000269|PubMed:27428332}.
CC   -!- SUBUNIT: (Microbial infection) Interacts with HIV-1 Vif
CC       (PubMed:16920826, PubMed:23001005). This interaction triggers APOBEC3D
CC       polyubiquitylation and degradation by the 26S proteasome
CC       (PubMed:16920826). {ECO:0000269|PubMed:16920826,
CC       ECO:0000269|PubMed:23001005}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000269|PubMed:27289067,
CC       ECO:0000269|PubMed:27428332}. Cytoplasm, P-body.
CC   -!- TISSUE SPECIFICITY: Expressed in lymphoid organs. Also detected in non-
CC       lymphoid tissues including lung. {ECO:0000269|PubMed:20308164}.
CC   -!- DOMAIN: The CMP/dCMP deaminase domain 1 mediates RNA binding, RNA-
CC       dependent oligomerization and virion incorporation whereas the CMP/dCMP
CC       deaminase domain 2 confers deoxycytidine deaminase activity and
CC       substrate sequence specificity.
CC   -!- MISCELLANEOUS: It is one of seven related genes or pseudogenes found in
CC       a cluster, thought to result from gene duplication, on chromosome 22.
CC   -!- SIMILARITY: Belongs to the cytidine and deoxycytidylate deaminase
CC       family. {ECO:0000305}.
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DR   EMBL; AL022318; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   CCDS; CCDS46709.1; -.
DR   AlphaFoldDB; Q96AK3; -.
DR   SMR; Q96AK3; -.
DR   IntAct; Q96AK3; 59.
DR   MINT; Q96AK3; -.
DR   STRING; 9606.ENSP00000216099; -.
DR   iPTMnet; Q96AK3; -.
DR   PhosphoSitePlus; Q96AK3; -.
DR   BioMuta; APOBEC3D; -.
DR   DMDM; 48474596; -.
DR   EPD; Q96AK3; -.
DR   jPOST; Q96AK3; -.
DR   MassIVE; Q96AK3; -.
DR   MaxQB; Q96AK3; -.
DR   PaxDb; Q96AK3; -.
DR   PeptideAtlas; Q96AK3; -.
DR   PRIDE; Q96AK3; -.
DR   ProteomicsDB; 75971; -.
DR   Antibodypedia; 35025; 172 antibodies from 27 providers.
DR   DNASU; 140564; -.
DR   Ensembl; ENST00000216099.13; ENSP00000216099.7; ENSG00000243811.12.
DR   MANE-Select; ENST00000216099.13; ENSP00000216099.7; NM_152426.4; NP_689639.2.
DR   UCSC; uc003awt.5; human.
DR   GeneCards; APOBEC3D; -.
DR   HGNC; HGNC:17354; APOBEC3D.
DR   HPA; ENSG00000243811; Tissue enhanced (lymphoid).
DR   MIM; 609900; gene.
DR   neXtProt; NX_Q96AK3; -.
DR   OpenTargets; ENSG00000243811; -.
DR   PharmGKB; PA24894; -.
DR   VEuPathDB; HostDB:ENSG00000243811; -.
DR   eggNOG; KOG4075; Eukaryota.
DR   GeneTree; ENSGT00940000162695; -.
DR   HOGENOM; CLU_047918_0_0_1; -.
DR   OMA; HTELCIL; -.
DR   OrthoDB; 586309at2759; -.
DR   PhylomeDB; Q96AK3; -.
DR   TreeFam; TF331356; -.
DR   BRENDA; 3.5.4.38; 2681.
DR   PathwayCommons; Q96AK3; -.
DR   SignaLink; Q96AK3; -.
DR   SIGNOR; Q96AK3; -.
DR   Pharos; Q96AK3; Tbio.
DR   PRO; PR:Q96AK3; -.
DR   Proteomes; UP000005640; Chromosome 22.
DR   RNAct; Q96AK3; protein.
DR   Bgee; ENSG00000243811; Expressed in granulocyte and 98 other tissues.
DR   ExpressionAtlas; Q96AK3; baseline and differential.
DR   Genevisible; Q96AK3; HS.
DR   GO; GO:0005737; C:cytoplasm; IDA:UniProtKB.
DR   GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR   GO; GO:0000932; C:P-body; IDA:UniProtKB.
DR   GO; GO:0004126; F:cytidine deaminase activity; IBA:GO_Central.
DR   GO; GO:0047844; F:deoxycytidine deaminase activity; IBA:GO_Central.
DR   GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   GO; GO:0016554; P:cytidine to uridine editing; IBA:GO_Central.
DR   GO; GO:0051607; P:defense response to virus; IDA:UniProtKB.
DR   GO; GO:0070383; P:DNA cytosine deamination; IDA:UniProtKB.
DR   GO; GO:0080111; P:DNA demethylation; IBA:GO_Central.
DR   GO; GO:0045087; P:innate immune response; IEA:UniProtKB-KW.
DR   GO; GO:0045869; P:negative regulation of single stranded viral RNA replication via double stranded DNA intermediate; IDA:UniProtKB.
DR   GO; GO:0010529; P:negative regulation of transposition; IDA:UniProtKB.
DR   InterPro; IPR016192; APOBEC/CMP_deaminase_Zn-bd.
DR   InterPro; IPR002125; CMP_dCMP_dom.
DR   InterPro; IPR016193; Cytidine_deaminase-like.
DR   SUPFAM; SSF53927; SSF53927; 2.
DR   PROSITE; PS00903; CYT_DCMP_DEAMINASES_1; 2.
DR   PROSITE; PS51747; CYT_DCMP_DEAMINASES_2; 2.
PE   1: Evidence at protein level;
KW   Antiviral defense; Cytoplasm; Hydrolase; Immunity; Innate immunity;
KW   Metal-binding; Reference proteome; Repeat; Zinc.
FT   CHAIN           1..386
FT                   /note="DNA dC->dU-editing enzyme APOBEC-3D"
FT                   /id="PRO_0000171756"
FT   DOMAIN          29..145
FT                   /note="CMP/dCMP-type deaminase 1"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01083"
FT   DOMAIN          187..334
FT                   /note="CMP/dCMP-type deaminase 2"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01083"
FT   ACT_SITE        264
FT                   /note="Proton donor"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01083"
FT   BINDING         78
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="1"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01083"
FT   BINDING         109
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="1"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01083"
FT   BINDING         112
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="1"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01083"
FT   BINDING         262
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="2"
FT                   /ligand_note="catalytic"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01083"
FT   BINDING         293
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="2"
FT                   /ligand_note="catalytic"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01083"
FT   BINDING         296
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /ligand_label="2"
FT                   /ligand_note="catalytic"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01083"
FT   MUTAGEN         140
FT                   /note="D->K: About two-third loss of anti HIV-1 activity."
FT                   /evidence="ECO:0000269|PubMed:16920826"
FT   MUTAGEN         264
FT                   /note="E->Q: No effect on Vif binding."
FT                   /evidence="ECO:0000269|PubMed:23001005"
FT   MUTAGEN         268
FT                   /note="L->D: Resistant to HIV-1 Vif and abolishes Vif
FT                   binding."
FT                   /evidence="ECO:0000269|PubMed:23001005"
FT   MUTAGEN         271
FT                   /note="F->A: Resistant to HIV-1 Vif and abolishes Vif
FT                   binding."
FT                   /evidence="ECO:0000269|PubMed:23001005"
FT   MUTAGEN         272
FT                   /note="C->K: Resistant to HIV-1 Vif and reduces Vif
FT                   binding."
FT                   /evidence="ECO:0000269|PubMed:23001005"
FT   MUTAGEN         275..276
FT                   /note="IL->AA: Resistant to HIV-1 Vif and abolishes Vif
FT                   binding."
FT                   /evidence="ECO:0000269|PubMed:23001005"
FT   MUTAGEN         277
FT                   /note="S->D: Resistant to HIV-1 Vif and reduces Vif
FT                   binding."
FT                   /evidence="ECO:0000269|PubMed:23001005"
FT   MUTAGEN         282
FT                   /note="Y->A: Resistant to HIV-1 Vif and abolishes Vif
FT                   binding."
FT                   /evidence="ECO:0000269|PubMed:23001005"
FT   MUTAGEN         302
FT                   /note="E->K: Resistant to HIV-1 Vif and abolishes Vif
FT                   binding."
FT                   /evidence="ECO:0000269|PubMed:23001005"
FT   MUTAGEN         303
FT                   /note="F->K: Resistant to HIV-1 Vif and abolishes Vif
FT                   binding."
FT                   /evidence="ECO:0000269|PubMed:23001005"
FT   MUTAGEN         307
FT                   /note="H->D: Resistant to HIV-1 Vif and abolishes Vif
FT                   binding."
FT                   /evidence="ECO:0000269|PubMed:23001005"
FT   MUTAGEN         337
FT                   /note="E->A: Resistant to HIV-1 Vif and reduces Vif
FT                   binding."
FT                   /evidence="ECO:0000269|PubMed:23001005"
FT   MUTAGEN         337
FT                   /note="E->K: Resistant to HIV-1 Vif and abolishes Vif
FT                   binding."
FT                   /evidence="ECO:0000269|PubMed:23001005"
SQ   SEQUENCE   386 AA;  46598 MW;  94C7253BDCC85B22 CRC64;
     MNPQIRNPME RMYRDTFYDN FENEPILYGR SYTWLCYEVK IKRGRSNLLW DTGVFRGPVL
     PKRQSNHRQE VYFRFENHAE MCFLSWFCGN RLPANRRFQI TWFVSWNPCL PCVVKVTKFL
     AEHPNVTLTI SAARLYYYRD RDWRWVLLRL HKAGARVKIM DYEDFAYCWE NFVCNEGQPF
     MPWYKFDDNY ASLHRTLKEI LRNPMEAMYP HIFYFHFKNL LKACGRNESW LCFTMEVTKH
     HSAVFRKRGV FRNQVDPETH CHAERCFLSW FCDDILSPNT NYEVTWYTSW SPCPECAGEV
     AEFLARHSNV NLTIFTARLC YFWDTDYQEG LCSLSQEGAS VKIMGYKDFV SCWKNFVYSD
     DEPFKPWKGL QTNFRLLKRR LREILQ
 
 
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