RS17_MYCS2
ID RS17_MYCS2 Reviewed; 98 AA.
AC A0QSE0; I7FY86;
DT 10-AUG-2010, integrated into UniProtKB/Swiss-Prot.
DT 09-JAN-2007, sequence version 1.
DT 25-MAY-2022, entry version 97.
DE RecName: Full=30S ribosomal protein S17;
GN Name=rpsQ; OrderedLocusNames=MSMEG_1445, MSMEI_1409;
OS Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) (Mycobacterium
OS smegmatis).
OC Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
OC Mycolicibacterium.
OX NCBI_TaxID=246196;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700084 / mc(2)155;
RA Fleischmann R.D., Dodson R.J., Haft D.H., Merkel J.S., Nelson W.C.,
RA Fraser C.M.;
RL Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700084 / mc(2)155;
RX PubMed=17295914; DOI=10.1186/gb-2007-8-2-r20;
RA Deshayes C., Perrodou E., Gallien S., Euphrasie D., Schaeffer C.,
RA Van-Dorsselaer A., Poch O., Lecompte O., Reyrat J.-M.;
RT "Interrupted coding sequences in Mycobacterium smegmatis: authentic
RT mutations or sequencing errors?";
RL Genome Biol. 8:R20.1-R20.9(2007).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700084 / mc(2)155;
RX PubMed=18955433; DOI=10.1101/gr.081901.108;
RA Gallien S., Perrodou E., Carapito C., Deshayes C., Reyrat J.-M.,
RA Van Dorsselaer A., Poch O., Schaeffer C., Lecompte O.;
RT "Ortho-proteogenomics: multiple proteomes investigation through orthology
RT and a new MS-based protocol.";
RL Genome Res. 19:128-135(2009).
RN [4]
RP PUPYLATION AT LYS-96, AND IDENTIFICATION BY MASS SPECTROMETRY.
RX PubMed=20094657; DOI=10.1039/b916104j;
RA Watrous J., Burns K., Liu W.T., Patel A., Hook V., Bafna V.,
RA Barry C.E. III, Bark S., Dorrestein P.C.;
RT "Expansion of the mycobacterial 'PUPylome'.";
RL Mol. Biosyst. 6:376-385(2010).
CC -!- FUNCTION: One of the primary rRNA binding proteins, it binds
CC specifically to the 5'-end of 16S ribosomal RNA. {ECO:0000250}.
CC -!- SUBUNIT: Part of the 30S ribosomal subunit. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uS17 family.
CC {ECO:0000305}.
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DR EMBL; CP000480; ABK72361.1; -; Genomic_DNA.
DR EMBL; CP001663; AFP37882.1; -; Genomic_DNA.
DR RefSeq; WP_011727674.1; NZ_SIJM01000016.1.
DR RefSeq; YP_885828.1; NC_008596.1.
DR PDB; 5O5J; EM; 3.45 A; Q=1-98.
DR PDB; 5O61; EM; 3.31 A; BQ=1-98.
DR PDB; 5XYU; EM; 3.45 A; Q=1-98.
DR PDB; 5ZEB; EM; 3.40 A; q=1-98.
DR PDB; 5ZEP; EM; 3.40 A; q=1-98.
DR PDB; 5ZEU; EM; 3.70 A; q=1-98.
DR PDB; 6DZI; EM; 3.46 A; 5=4-97.
DR PDB; 6DZK; EM; 3.60 A; Q=1-98.
DR PDBsum; 5O5J; -.
DR PDBsum; 5O61; -.
DR PDBsum; 5XYU; -.
DR PDBsum; 5ZEB; -.
DR PDBsum; 5ZEP; -.
DR PDBsum; 5ZEU; -.
DR PDBsum; 6DZI; -.
DR PDBsum; 6DZK; -.
DR AlphaFoldDB; A0QSE0; -.
DR SMR; A0QSE0; -.
DR IntAct; A0QSE0; 2.
DR STRING; 246196.MSMEI_1409; -.
DR PRIDE; A0QSE0; -.
DR EnsemblBacteria; ABK72361; ABK72361; MSMEG_1445.
DR EnsemblBacteria; AFP37882; AFP37882; MSMEI_1409.
DR GeneID; 66732904; -.
DR KEGG; msg:MSMEI_1409; -.
DR KEGG; msm:MSMEG_1445; -.
DR PATRIC; fig|246196.19.peg.1431; -.
DR eggNOG; COG0186; Bacteria.
DR OMA; HPMYGKF; -.
DR OrthoDB; 2035880at2; -.
DR Proteomes; UP000000757; Chromosome.
DR Proteomes; UP000006158; Chromosome.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR Gene3D; 2.40.50.140; -; 1.
DR HAMAP; MF_01345_B; Ribosomal_S17_B; 1.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR019984; Ribosomal_S17.
DR InterPro; IPR000266; Ribosomal_S17/S11.
DR InterPro; IPR019979; Ribosomal_S17_CS.
DR PANTHER; PTHR10744; PTHR10744; 1.
DR Pfam; PF00366; Ribosomal_S17; 1.
DR PRINTS; PR00973; RIBOSOMALS17.
DR SUPFAM; SSF50249; SSF50249; 1.
DR TIGRFAMs; TIGR03635; uS17_bact; 1.
DR PROSITE; PS00056; RIBOSOMAL_S17; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Isopeptide bond; Reference proteome; Ribonucleoprotein;
KW Ribosomal protein; RNA-binding; rRNA-binding; Ubl conjugation.
FT CHAIN 1..98
FT /note="30S ribosomal protein S17"
FT /id="PRO_0000396098"
FT REGION 1..21
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CROSSLNK 96
FT /note="Isoglutamyl lysine isopeptide (Lys-Gln) (interchain
FT with Q-Cter in protein Pup)"
FT /evidence="ECO:0000269|PubMed:20094657"
FT STRAND 22..32
FT /evidence="ECO:0007829|PDB:5XYU"
FT STRAND 35..45
FT /evidence="ECO:0007829|PDB:5XYU"
FT TURN 47..49
FT /evidence="ECO:0007829|PDB:5XYU"
FT STRAND 52..62
FT /evidence="ECO:0007829|PDB:5XYU"
FT STRAND 73..83
FT /evidence="ECO:0007829|PDB:5XYU"
FT STRAND 86..95
FT /evidence="ECO:0007829|PDB:5XYU"
SQ SEQUENCE 98 AA; 11102 MW; 6BC9DDA0ECE4C36F CRC64;
MADQKGPKYT PAAEKPRGRR KTAIGYVVSD KMQKTIVVEL EDRKSHPLYG KIIRTTKKVK
AHDENGEAGI GDRVSLMETR PLSATKRWRL VEILEKAK
