B3GT5_ARATH
ID B3GT5_ARATH Reviewed; 398 AA.
AC Q9LM60;
DT 20-JAN-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 111.
DE RecName: Full=Probable beta-1,3-galactosyltransferase 5;
DE EC=2.4.1.-;
GN Name=B3GALT5; OrderedLocusNames=At1g22015; ORFNames=F2E2.6;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=18548197; DOI=10.1007/s11103-008-9351-3;
RA Qu Y., Egelund J., Gilson P.R., Houghton F., Gleeson P.A., Schultz C.J.,
RA Bacic A.;
RT "Identification of a novel group of putative Arabidopsis thaliana beta-
RT (1,3)-galactosyltransferases.";
RL Plant Mol. Biol. 68:43-59(2008).
CC -!- FUNCTION: Beta-1,3-galactosyltransferase that transfers galactose from
CC UDP-galactose to substrates with a terminal glycosyl residue.
CC {ECO:0000250}.
CC -!- COFACTOR:
CC Name=Mn(2+); Xref=ChEBI:CHEBI:29035; Evidence={ECO:0000250};
CC -!- PATHWAY: Protein modification; protein glycosylation.
CC -!- SUBCELLULAR LOCATION: Golgi apparatus membrane {ECO:0000305}; Single-
CC pass type II membrane protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the glycosyltransferase 31 family.
CC {ECO:0000305}.
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DR EMBL; AC069252; AAF86563.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE30185.1; -; Genomic_DNA.
DR EMBL; AK226416; BAE98561.1; -; mRNA.
DR PIR; B86353; B86353.
DR RefSeq; NP_564154.1; NM_102051.3.
DR AlphaFoldDB; Q9LM60; -.
DR SMR; Q9LM60; -.
DR STRING; 3702.AT1G22015.1; -.
DR CAZy; GT31; Glycosyltransferase Family 31.
DR PaxDb; Q9LM60; -.
DR PRIDE; Q9LM60; -.
DR ProteomicsDB; 240958; -.
DR EnsemblPlants; AT1G22015.1; AT1G22015.1; AT1G22015.
DR GeneID; 838806; -.
DR Gramene; AT1G22015.1; AT1G22015.1; AT1G22015.
DR KEGG; ath:AT1G22015; -.
DR Araport; AT1G22015; -.
DR TAIR; locus:505006138; AT1G22015.
DR eggNOG; KOG2288; Eukaryota.
DR HOGENOM; CLU_040730_3_0_1; -.
DR InParanoid; Q9LM60; -.
DR OMA; CARFIVK; -.
DR OrthoDB; 640360at2759; -.
DR PhylomeDB; Q9LM60; -.
DR UniPathway; UPA00378; -.
DR PRO; PR:Q9LM60; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9LM60; baseline and differential.
DR Genevisible; Q9LM60; AT.
DR GO; GO:0000139; C:Golgi membrane; IBA:GO_Central.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0048531; F:beta-1,3-galactosyltransferase activity; IBA:GO_Central.
DR GO; GO:0008378; F:galactosyltransferase activity; IDA:TAIR.
DR GO; GO:0016757; F:glycosyltransferase activity; IBA:GO_Central.
DR GO; GO:0008194; F:UDP-glycosyltransferase activity; IBA:GO_Central.
DR GO; GO:0006486; P:protein glycosylation; IEA:UniProtKB-UniPathway.
DR InterPro; IPR025298; DUF4094.
DR InterPro; IPR002659; Glyco_trans_31.
DR PANTHER; PTHR11214; PTHR11214; 1.
DR Pfam; PF13334; DUF4094; 1.
DR Pfam; PF01762; Galactosyl_T; 1.
PE 2: Evidence at transcript level;
KW Glycoprotein; Glycosyltransferase; Golgi apparatus; Manganese; Membrane;
KW Reference proteome; Signal-anchor; Transferase; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..398
FT /note="Probable beta-1,3-galactosyltransferase 5"
FT /id="PRO_0000359415"
FT TRANSMEM 11..31
FT /note="Helical; Signal-anchor for type II membrane protein"
FT /evidence="ECO:0000255"
FT CARBOHYD 110
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 115
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 206
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
SQ SEQUENCE 398 AA; 45201 MW; 71FC854998FB968B CRC64;
MKHNNKVSKR LTMTWVPLLC ISCFFLGAIF TSKLRSASSD SGSQLILQHR RDQELKIVTQ
DYAHEKKKSQ DNDVMEEVLK THKAIESLDK SVSMLQKQLS ATHSPQQIVN VSATNSSTEG
NQKNKVFMVI GINTAFSSRK RRDSLRETWM PQGEKLEKLE KEKGIVVKFM IGHSSTPNSM
LDKEIDSEDA QYNDFFRLDH VEGYYNLSAK TKSFFSSAVA KWDAEFYVKI DDDVHVNLGT
LASTLASHRS KPRVYIGCMK SGPVLTKKTA KYREPEFWKF GEEGNKYFRH ATGQIYAISK
DLATYISNNQ PILHKYANED VTLGSWFIGL EVEQIDDRNF CCGTPPDCEM RAEAGEMCVA
TFDWKCSGVC RSVDRMWMVH VMCGEGSKAV WDANLKLS
