ABC3H_PONPY
ID ABC3H_PONPY Reviewed; 211 AA.
AC Q1WBT4;
DT 26-JUN-2007, integrated into UniProtKB/Swiss-Prot.
DT 02-MAY-2006, sequence version 1.
DT 03-AUG-2022, entry version 60.
DE RecName: Full=DNA dC->dU-editing enzyme APOBEC-3H;
DE EC=3.5.4.38;
DE AltName: Full=Apolipoprotein B mRNA-editing enzyme catalytic polypeptide-like 3H;
GN Name=APOBEC3H;
OS Pongo pygmaeus (Bornean orangutan).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Pongo.
OX NCBI_TaxID=9600;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RX PubMed=16571802; DOI=10.1128/jvi.80.8.3853-3862.2006;
RA OhAinle M., Kerns J.A., Malik H.S., Emerman M.;
RT "Adaptive evolution and antiviral activity of the conserved mammalian
RT cytidine deaminase APOBEC3H.";
RL J. Virol. 80:3853-3862(2006).
CC -!- FUNCTION: DNA deaminase (cytidine deaminase) which may act as an
CC inhibitor of retrovirus replication and retrotransposon mobility via
CC deaminase-dependent and -independent mechanisms. {ECO:0000250}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a 2'-deoxycytidine in single-stranded DNA + H(+) + H2O = a 2'-
CC deoxyuridine in single-stranded DNA + NH4(+); Xref=Rhea:RHEA:50948,
CC Rhea:RHEA-COMP:12846, Rhea:RHEA-COMP:12847, ChEBI:CHEBI:15377,
CC ChEBI:CHEBI:15378, ChEBI:CHEBI:28938, ChEBI:CHEBI:85452,
CC ChEBI:CHEBI:133902; EC=3.5.4.38;
CC -!- COFACTOR:
CC Name=Zn(2+); Xref=ChEBI:CHEBI:29105; Evidence={ECO:0000250};
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}.
CC -!- MISCELLANEOUS: APOBEC3H from old world monkeys has retained its
CC antiviral activity, while it is lost in other primates.
CC -!- SIMILARITY: Belongs to the cytidine and deoxycytidylate deaminase
CC family. {ECO:0000305}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; DQ408610; ABD72581.1; -; Genomic_DNA.
DR AlphaFoldDB; Q1WBT4; -.
DR SMR; Q1WBT4; -.
DR GO; GO:0005737; C:cytoplasm; ISS:UniProtKB.
DR GO; GO:0005634; C:nucleus; ISS:UniProtKB.
DR GO; GO:0000932; C:P-body; ISS:UniProtKB.
DR GO; GO:0004126; F:cytidine deaminase activity; ISS:UniProtKB.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0051607; P:defense response to virus; ISS:UniProtKB.
DR GO; GO:0070383; P:DNA cytosine deamination; ISS:UniProtKB.
DR GO; GO:0045087; P:innate immune response; IEA:UniProtKB-KW.
DR GO; GO:0010529; P:negative regulation of transposition; ISS:UniProtKB.
DR GO; GO:0048525; P:negative regulation of viral process; ISS:UniProtKB.
DR InterPro; IPR016192; APOBEC/CMP_deaminase_Zn-bd.
DR InterPro; IPR041512; APOBEC3H.
DR InterPro; IPR002125; CMP_dCMP_dom.
DR InterPro; IPR016193; Cytidine_deaminase-like.
DR Pfam; PF18771; APOBEC3; 1.
DR SUPFAM; SSF53927; SSF53927; 1.
DR PROSITE; PS00903; CYT_DCMP_DEAMINASES_1; 1.
DR PROSITE; PS51747; CYT_DCMP_DEAMINASES_2; 1.
PE 2: Evidence at transcript level;
KW Antiviral defense; Cytoplasm; Hydrolase; Immunity; Innate immunity;
KW Metal-binding; Zinc.
FT CHAIN 1..211
FT /note="DNA dC->dU-editing enzyme APOBEC-3H"
FT /id="PRO_0000291665"
FT DOMAIN 4..126
FT /note="CMP/dCMP-type deaminase"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01083"
FT ACT_SITE 56
FT /note="Proton donor"
FT /evidence="ECO:0000250"
FT BINDING 54
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250"
FT BINDING 85
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250"
FT BINDING 88
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250"
SQ SEQUENCE 211 AA; 24654 MW; 0B9812EE2AD5DD1E CRC64;
MALLTAKTFS LQFNNKRRIK RPYYPRKALL CYQLTPQNGS TPTRGYFKNK KKCHAEIRFI
NEIKSMGLDE TQCYQVTCYL TWSPCPSCVR ELVAFIKAHD HLNLRIFASR LYCHWCRRQQ
EGLRLLCGSQ VPVEVMGSRE FADCWENFVD HEKPLSFNPS EMLEELDKNS RAIKRRLERI
KQSWSVDVLE NGLRSLQLGP VSSSLSRSNS R