B3GTD_ARATH
ID B3GTD_ARATH Reviewed; 343 AA.
AC Q9LKA9;
DT 20-JAN-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 110.
DE RecName: Full=Probable beta-1,3-galactosyltransferase 13;
DE EC=2.4.1.-;
GN Name=B3GALT13; OrderedLocusNames=At3g14960; ORFNames=K15M2.10;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10907853; DOI=10.1093/dnares/7.3.217;
RA Kaneko T., Katoh T., Sato S., Nakamura Y., Asamizu E., Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 3. II. Sequence
RT features of the 4,251,695 bp regions covered by 90 P1, TAC and BAC
RT clones.";
RL DNA Res. 7:217-221(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=18548197; DOI=10.1007/s11103-008-9351-3;
RA Qu Y., Egelund J., Gilson P.R., Houghton F., Gleeson P.A., Schultz C.J.,
RA Bacic A.;
RT "Identification of a novel group of putative Arabidopsis thaliana beta-
RT (1,3)-galactosyltransferases.";
RL Plant Mol. Biol. 68:43-59(2008).
CC -!- FUNCTION: Beta-1,3-galactosyltransferase that transfers galactose from
CC UDP-galactose to substrates with a terminal glycosyl residue.
CC {ECO:0000250}.
CC -!- COFACTOR:
CC Name=Mn(2+); Xref=ChEBI:CHEBI:29035; Evidence={ECO:0000250};
CC -!- PATHWAY: Protein modification; protein glycosylation.
CC -!- SUBCELLULAR LOCATION: Golgi apparatus membrane {ECO:0000305}; Single-
CC pass type II membrane protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the glycosyltransferase 31 family.
CC {ECO:0000305}.
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DR EMBL; AP000370; BAA97059.1; -; Genomic_DNA.
DR EMBL; CP002686; AEE75594.1; -; Genomic_DNA.
DR EMBL; AY070398; AAL49894.1; -; mRNA.
DR EMBL; AY133728; AAM91662.1; -; mRNA.
DR RefSeq; NP_188114.1; NM_112358.4.
DR AlphaFoldDB; Q9LKA9; -.
DR SMR; Q9LKA9; -.
DR STRING; 3702.AT3G14960.1; -.
DR CAZy; GT31; Glycosyltransferase Family 31.
DR iPTMnet; Q9LKA9; -.
DR PaxDb; Q9LKA9; -.
DR PRIDE; Q9LKA9; -.
DR ProteomicsDB; 240961; -.
DR EnsemblPlants; AT3G14960.1; AT3G14960.1; AT3G14960.
DR GeneID; 820725; -.
DR Gramene; AT3G14960.1; AT3G14960.1; AT3G14960.
DR KEGG; ath:AT3G14960; -.
DR Araport; AT3G14960; -.
DR TAIR; locus:2086370; AT3G14960.
DR eggNOG; KOG2288; Eukaryota.
DR HOGENOM; CLU_040730_0_0_1; -.
DR InParanoid; Q9LKA9; -.
DR OMA; HENLHTL; -.
DR OrthoDB; 640360at2759; -.
DR PhylomeDB; Q9LKA9; -.
DR UniPathway; UPA00378; -.
DR PRO; PR:Q9LKA9; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q9LKA9; baseline and differential.
DR Genevisible; Q9LKA9; AT.
DR GO; GO:0005794; C:Golgi apparatus; HDA:TAIR.
DR GO; GO:0000139; C:Golgi membrane; IBA:GO_Central.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0008378; F:galactosyltransferase activity; IBA:GO_Central.
DR GO; GO:0016757; F:glycosyltransferase activity; IBA:GO_Central.
DR GO; GO:0008194; F:UDP-glycosyltransferase activity; IBA:GO_Central.
DR GO; GO:0006486; P:protein glycosylation; IEA:UniProtKB-UniPathway.
DR InterPro; IPR002659; Glyco_trans_31.
DR PANTHER; PTHR11214; PTHR11214; 1.
DR Pfam; PF01762; Galactosyl_T; 1.
PE 2: Evidence at transcript level;
KW Glycoprotein; Glycosyltransferase; Golgi apparatus; Manganese; Membrane;
KW Reference proteome; Signal-anchor; Transferase; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..343
FT /note="Probable beta-1,3-galactosyltransferase 13"
FT /id="PRO_0000359423"
FT TRANSMEM 22..42
FT /note="Helical; Signal-anchor for type II membrane protein"
FT /evidence="ECO:0000255"
FT CARBOHYD 265
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
SQ SEQUENCE 343 AA; 38722 MW; 6CE8668CB341B49A CRC64;
MSSSPKLFHA RPSFFTRRST PLIVFTSLAI GLTGFLFGLS TILFPGLRLS GRSCLTNLPP
KTVKIVWDVA GNSIVNGEVK RHKVMGFVGI QTGFRSAGRR RALRNTWMPS DPEGLRRLEE
STGLAIRFII GKTKDEAKMV ELRSEVAMYD DFILLDIEEE YSKLPYKTLA FFKAAYALYD
SEFYVKADDD IYLRPDRLSL LLAKERGHSQ TYLGCMKKGP VFTDPKLKWY EPLADLLGKE
YFLHAYGPIY ALSADVVTSL VALKNNSFRM FSNEDVTIGA WMLAMNVNHE NLHTLCEPEC
SPYSIAVWDI PKCSGLCNPE KRMLELHMLE SCSKSPTLPS DDE
