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RS1_COXBU
ID   RS1_COXBU               Reviewed;         551 AA.
AC   Q83E09;
DT   26-FEB-2008, integrated into UniProtKB/Swiss-Prot.
DT   01-JUN-2003, sequence version 1.
DT   25-MAY-2022, entry version 95.
DE   RecName: Full=30S ribosomal protein S1;
GN   Name=rpsA; OrderedLocusNames=CBU_0528;
OS   Coxiella burnetii (strain RSA 493 / Nine Mile phase I).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Coxiellaceae;
OC   Coxiella.
OX   NCBI_TaxID=227377;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=RSA 493 / Nine Mile phase I;
RX   PubMed=12704232; DOI=10.1073/pnas.0931379100;
RA   Seshadri R., Paulsen I.T., Eisen J.A., Read T.D., Nelson K.E., Nelson W.C.,
RA   Ward N.L., Tettelin H., Davidsen T.M., Beanan M.J., DeBoy R.T.,
RA   Daugherty S.C., Brinkac L.M., Madupu R., Dodson R.J., Khouri H.M.,
RA   Lee K.H., Carty H.A., Scanlan D., Heinzen R.A., Thompson H.A., Samuel J.E.,
RA   Fraser C.M., Heidelberg J.F.;
RT   "Complete genome sequence of the Q-fever pathogen, Coxiella burnetii.";
RL   Proc. Natl. Acad. Sci. U.S.A. 100:5455-5460(2003).
RN   [2]
RP   IDENTIFICATION BY MASS SPECTROMETRY, AND DEVELOPMENTAL STAGE.
RC   STRAIN=Nine Mile Crazy / RSA 514;
RX   PubMed=17088354; DOI=10.1128/iai.00883-06;
RA   Coleman S.A., Fischer E.R., Cockrell D.C., Voth D.E., Howe D., Mead D.J.,
RA   Samuel J.E., Heinzen R.A.;
RT   "Proteome and antigen profiling of Coxiella burnetii developmental forms.";
RL   Infect. Immun. 75:290-298(2007).
CC   -!- FUNCTION: Binds mRNA; thus facilitating recognition of the initiation
CC       point. It is needed to translate mRNA with a short Shine-Dalgarno (SD)
CC       purine-rich sequence (By similarity). {ECO:0000250}.
CC   -!- DEVELOPMENTAL STAGE: More than twofold more abundant in the large cell
CC       variant (LCV) stage than in the small cell variant (SCV) stage (at
CC       protein level). LCVs are more metabolically active than SCVs.
CC       {ECO:0000269|PubMed:17088354}.
CC   -!- SIMILARITY: Belongs to the bacterial ribosomal protein bS1 family.
CC       {ECO:0000305}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=AAO90074.2; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR   EMBL; AE016828; AAO90074.2; ALT_INIT; Genomic_DNA.
DR   RefSeq; NP_819560.2; NC_002971.3.
DR   RefSeq; WP_012220248.1; NC_002971.4.
DR   AlphaFoldDB; Q83E09; -.
DR   SMR; Q83E09; -.
DR   STRING; 227377.CBU_0528; -.
DR   EnsemblBacteria; AAO90074; AAO90074; CBU_0528.
DR   GeneID; 1208413; -.
DR   KEGG; cbu:CBU_0528; -.
DR   PATRIC; fig|227377.7.peg.523; -.
DR   eggNOG; COG0539; Bacteria.
DR   HOGENOM; CLU_015805_2_1_6; -.
DR   OMA; SLNEFRY; -.
DR   Proteomes; UP000002671; Chromosome.
DR   GO; GO:0022627; C:cytosolic small ribosomal subunit; IBA:GO_Central.
DR   GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR   GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR   GO; GO:0006412; P:translation; IBA:GO_Central.
DR   Gene3D; 2.40.50.140; -; 6.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR035104; Ribosomal_protein_S1-like.
DR   InterPro; IPR000110; Ribosomal_S1.
DR   InterPro; IPR022967; S1_dom.
DR   InterPro; IPR003029; S1_domain.
DR   PANTHER; PTHR10724:SF7; PTHR10724:SF7; 3.
DR   Pfam; PF00575; S1; 6.
DR   PIRSF; PIRSF002111; RpsA; 1.
DR   PRINTS; PR00681; RIBOSOMALS1.
DR   SMART; SM00316; S1; 6.
DR   SUPFAM; SSF50249; SSF50249; 6.
DR   TIGRFAMs; TIGR00717; rpsA; 1.
DR   PROSITE; PS50126; S1; 6.
PE   1: Evidence at protein level;
KW   Reference proteome; Repeat; Ribonucleoprotein; Ribosomal protein;
KW   RNA-binding.
FT   CHAIN           1..551
FT                   /note="30S ribosomal protein S1"
FT                   /id="PRO_0000322123"
FT   DOMAIN          21..83
FT                   /note="S1 motif 1"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00180"
FT   DOMAIN          101..167
FT                   /note="S1 motif 2"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00180"
FT   DOMAIN          188..256
FT                   /note="S1 motif 3"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00180"
FT   DOMAIN          273..343
FT                   /note="S1 motif 4"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00180"
FT   DOMAIN          360..430
FT                   /note="S1 motif 5"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00180"
FT   DOMAIN          447..516
FT                   /note="S1 motif 6"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00180"
SQ   SEQUENCE   551 AA;  62121 MW;  91A90EDE577C679D CRC64;
     MSETFAELFE KSLTETDLRP GALVKATVVE VRPDRVIVNA GLKSEGIIPA SEFRNEEPHV
     GDEFFVVIEA SDNGFGETRL SREKARRAKA WSELEKAYKA GEMVKGVIIE RVKGGFTVDL
     NSVRAFLPGS LVDVKPVRDP GYLEDKEIDF KIIKMDQRRN NVVVSRRAVM EAETSAERQA
     RLEELQEGQE IKGVIKNITD YGAFVDLGGV DGLLHITDMA WGRVKHPSDL LNVGDEVHVK
     VLKFDRDKKR VSLGMKQLAD DPWAKIERRY PVNSRVFGKV TNITDYGCFV KLEEGVEGLV
     HTSELDWTNK NIHPSKVVQS GEEVEVMVLE IDEERRRISL GIKQCKRNPW QEFAEKHEKD
     EKITGKVRSI TDFGMFIGLE GDIDGLVHLS DISWTESGEE AIRNYKKGDE VQAVILGIDP
     ERERISLGIK QLEGDPFMEF VESYDKDAVI QAKVKEVESK QAVLELADQV LGQMRLADYT
     YDRVKDLTQE LNVGDEVAVK IVNVDRKNRL INVSHKAVEG RSEKGTRTVS DVPTKTTLGD
     LLKEKIQSKD E
 
 
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