RS1_COXBU
ID RS1_COXBU Reviewed; 551 AA.
AC Q83E09;
DT 26-FEB-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2003, sequence version 1.
DT 25-MAY-2022, entry version 95.
DE RecName: Full=30S ribosomal protein S1;
GN Name=rpsA; OrderedLocusNames=CBU_0528;
OS Coxiella burnetii (strain RSA 493 / Nine Mile phase I).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Coxiellaceae;
OC Coxiella.
OX NCBI_TaxID=227377;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=RSA 493 / Nine Mile phase I;
RX PubMed=12704232; DOI=10.1073/pnas.0931379100;
RA Seshadri R., Paulsen I.T., Eisen J.A., Read T.D., Nelson K.E., Nelson W.C.,
RA Ward N.L., Tettelin H., Davidsen T.M., Beanan M.J., DeBoy R.T.,
RA Daugherty S.C., Brinkac L.M., Madupu R., Dodson R.J., Khouri H.M.,
RA Lee K.H., Carty H.A., Scanlan D., Heinzen R.A., Thompson H.A., Samuel J.E.,
RA Fraser C.M., Heidelberg J.F.;
RT "Complete genome sequence of the Q-fever pathogen, Coxiella burnetii.";
RL Proc. Natl. Acad. Sci. U.S.A. 100:5455-5460(2003).
RN [2]
RP IDENTIFICATION BY MASS SPECTROMETRY, AND DEVELOPMENTAL STAGE.
RC STRAIN=Nine Mile Crazy / RSA 514;
RX PubMed=17088354; DOI=10.1128/iai.00883-06;
RA Coleman S.A., Fischer E.R., Cockrell D.C., Voth D.E., Howe D., Mead D.J.,
RA Samuel J.E., Heinzen R.A.;
RT "Proteome and antigen profiling of Coxiella burnetii developmental forms.";
RL Infect. Immun. 75:290-298(2007).
CC -!- FUNCTION: Binds mRNA; thus facilitating recognition of the initiation
CC point. It is needed to translate mRNA with a short Shine-Dalgarno (SD)
CC purine-rich sequence (By similarity). {ECO:0000250}.
CC -!- DEVELOPMENTAL STAGE: More than twofold more abundant in the large cell
CC variant (LCV) stage than in the small cell variant (SCV) stage (at
CC protein level). LCVs are more metabolically active than SCVs.
CC {ECO:0000269|PubMed:17088354}.
CC -!- SIMILARITY: Belongs to the bacterial ribosomal protein bS1 family.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAO90074.2; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR EMBL; AE016828; AAO90074.2; ALT_INIT; Genomic_DNA.
DR RefSeq; NP_819560.2; NC_002971.3.
DR RefSeq; WP_012220248.1; NC_002971.4.
DR AlphaFoldDB; Q83E09; -.
DR SMR; Q83E09; -.
DR STRING; 227377.CBU_0528; -.
DR EnsemblBacteria; AAO90074; AAO90074; CBU_0528.
DR GeneID; 1208413; -.
DR KEGG; cbu:CBU_0528; -.
DR PATRIC; fig|227377.7.peg.523; -.
DR eggNOG; COG0539; Bacteria.
DR HOGENOM; CLU_015805_2_1_6; -.
DR OMA; SLNEFRY; -.
DR Proteomes; UP000002671; Chromosome.
DR GO; GO:0022627; C:cytosolic small ribosomal subunit; IBA:GO_Central.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0006412; P:translation; IBA:GO_Central.
DR Gene3D; 2.40.50.140; -; 6.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR035104; Ribosomal_protein_S1-like.
DR InterPro; IPR000110; Ribosomal_S1.
DR InterPro; IPR022967; S1_dom.
DR InterPro; IPR003029; S1_domain.
DR PANTHER; PTHR10724:SF7; PTHR10724:SF7; 3.
DR Pfam; PF00575; S1; 6.
DR PIRSF; PIRSF002111; RpsA; 1.
DR PRINTS; PR00681; RIBOSOMALS1.
DR SMART; SM00316; S1; 6.
DR SUPFAM; SSF50249; SSF50249; 6.
DR TIGRFAMs; TIGR00717; rpsA; 1.
DR PROSITE; PS50126; S1; 6.
PE 1: Evidence at protein level;
KW Reference proteome; Repeat; Ribonucleoprotein; Ribosomal protein;
KW RNA-binding.
FT CHAIN 1..551
FT /note="30S ribosomal protein S1"
FT /id="PRO_0000322123"
FT DOMAIN 21..83
FT /note="S1 motif 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00180"
FT DOMAIN 101..167
FT /note="S1 motif 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00180"
FT DOMAIN 188..256
FT /note="S1 motif 3"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00180"
FT DOMAIN 273..343
FT /note="S1 motif 4"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00180"
FT DOMAIN 360..430
FT /note="S1 motif 5"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00180"
FT DOMAIN 447..516
FT /note="S1 motif 6"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00180"
SQ SEQUENCE 551 AA; 62121 MW; 91A90EDE577C679D CRC64;
MSETFAELFE KSLTETDLRP GALVKATVVE VRPDRVIVNA GLKSEGIIPA SEFRNEEPHV
GDEFFVVIEA SDNGFGETRL SREKARRAKA WSELEKAYKA GEMVKGVIIE RVKGGFTVDL
NSVRAFLPGS LVDVKPVRDP GYLEDKEIDF KIIKMDQRRN NVVVSRRAVM EAETSAERQA
RLEELQEGQE IKGVIKNITD YGAFVDLGGV DGLLHITDMA WGRVKHPSDL LNVGDEVHVK
VLKFDRDKKR VSLGMKQLAD DPWAKIERRY PVNSRVFGKV TNITDYGCFV KLEEGVEGLV
HTSELDWTNK NIHPSKVVQS GEEVEVMVLE IDEERRRISL GIKQCKRNPW QEFAEKHEKD
EKITGKVRSI TDFGMFIGLE GDIDGLVHLS DISWTESGEE AIRNYKKGDE VQAVILGIDP
ERERISLGIK QLEGDPFMEF VESYDKDAVI QAKVKEVESK QAVLELADQV LGQMRLADYT
YDRVKDLTQE LNVGDEVAVK IVNVDRKNRL INVSHKAVEG RSEKGTRTVS DVPTKTTLGD
LLKEKIQSKD E