RS1_RHIME
ID RS1_RHIME Reviewed; 568 AA.
AC P14129;
DT 01-JAN-1990, integrated into UniProtKB/Swiss-Prot.
DT 30-MAY-2000, sequence version 2.
DT 25-MAY-2022, entry version 117.
DE RecName: Full=30S ribosomal protein S1;
GN Name=rpsA; OrderedLocusNames=R00255; ORFNames=SMc00335;
OS Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium
OS meliloti).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
OC Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.
OX NCBI_TaxID=266834;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=RCR2011 / SU47;
RX PubMed=3368316; DOI=10.1093/nar/16.7.3075;
RA Schnier J., Thamm S., Lurz R., Hussain A., Faist G., Dobrinski B.;
RT "Cloning and characterization of a gene from Rhizobium melilotii 2011
RT coding for ribosomal protein S1.";
RL Nucleic Acids Res. 16:3075-3089(1988).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=1021;
RX PubMed=11481430; DOI=10.1073/pnas.161294398;
RA Capela D., Barloy-Hubler F., Gouzy J., Bothe G., Ampe F., Batut J.,
RA Boistard P., Becker A., Boutry M., Cadieu E., Dreano S., Gloux S.,
RA Godrie T., Goffeau A., Kahn D., Kiss E., Lelaure V., Masuy D., Pohl T.,
RA Portetelle D., Puehler A., Purnelle B., Ramsperger U., Renard C.,
RA Thebault P., Vandenbol M., Weidner S., Galibert F.;
RT "Analysis of the chromosome sequence of the legume symbiont Sinorhizobium
RT meliloti strain 1021.";
RL Proc. Natl. Acad. Sci. U.S.A. 98:9877-9882(2001).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=1021;
RX PubMed=11474104; DOI=10.1126/science.1060966;
RA Galibert F., Finan T.M., Long S.R., Puehler A., Abola P., Ampe F.,
RA Barloy-Hubler F., Barnett M.J., Becker A., Boistard P., Bothe G.,
RA Boutry M., Bowser L., Buhrmester J., Cadieu E., Capela D., Chain P.,
RA Cowie A., Davis R.W., Dreano S., Federspiel N.A., Fisher R.F., Gloux S.,
RA Godrie T., Goffeau A., Golding B., Gouzy J., Gurjal M., Hernandez-Lucas I.,
RA Hong A., Huizar L., Hyman R.W., Jones T., Kahn D., Kahn M.L., Kalman S.,
RA Keating D.H., Kiss E., Komp C., Lelaure V., Masuy D., Palm C., Peck M.C.,
RA Pohl T.M., Portetelle D., Purnelle B., Ramsperger U., Surzycki R.,
RA Thebault P., Vandenbol M., Vorhoelter F.J., Weidner S., Wells D.H.,
RA Wong K., Yeh K.-C., Batut J.;
RT "The composite genome of the legume symbiont Sinorhizobium meliloti.";
RL Science 293:668-672(2001).
CC -!- FUNCTION: Binds mRNA; thus facilitating recognition of the initiation
CC point. It is needed to translate mRNA with a short Shine-Dalgarno (SD)
CC purine-rich sequence (By similarity). {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the bacterial ribosomal protein bS1 family.
CC {ECO:0000305}.
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DR EMBL; X07528; CAA30404.1; -; Genomic_DNA.
DR EMBL; AL591688; CAC41692.1; -; Genomic_DNA.
DR PIR; S01055; R3ZR1.
DR RefSeq; NP_384361.1; NC_003047.1.
DR RefSeq; WP_003534399.1; NC_003047.1.
DR AlphaFoldDB; P14129; -.
DR STRING; 266834.SMc00335; -.
DR EnsemblBacteria; CAC41692; CAC41692; SMc00335.
DR GeneID; 61601735; -.
DR KEGG; sme:SMc00335; -.
DR PATRIC; fig|266834.11.peg.1622; -.
DR eggNOG; COG0539; Bacteria.
DR HOGENOM; CLU_015805_2_1_5; -.
DR OMA; SLNEFRY; -.
DR Proteomes; UP000001976; Chromosome.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR Gene3D; 2.40.50.140; -; 6.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR035104; Ribosomal_protein_S1-like.
DR InterPro; IPR000110; Ribosomal_S1.
DR InterPro; IPR022967; S1_dom.
DR InterPro; IPR003029; S1_domain.
DR PANTHER; PTHR10724:SF7; PTHR10724:SF7; 3.
DR Pfam; PF00575; S1; 6.
DR PIRSF; PIRSF002111; RpsA; 1.
DR PRINTS; PR00681; RIBOSOMALS1.
DR SMART; SM00316; S1; 6.
DR SUPFAM; SSF50249; SSF50249; 6.
DR TIGRFAMs; TIGR00717; rpsA; 1.
DR PROSITE; PS50126; S1; 6.
PE 3: Inferred from homology;
KW Reference proteome; Repeat; Ribonucleoprotein; Ribosomal protein;
KW RNA-binding.
FT CHAIN 1..568
FT /note="30S ribosomal protein S1"
FT /id="PRO_0000196044"
FT DOMAIN 27..93
FT /note="S1 motif 1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00180"
FT DOMAIN 111..177
FT /note="S1 motif 2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00180"
FT DOMAIN 198..266
FT /note="S1 motif 3"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00180"
FT DOMAIN 283..353
FT /note="S1 motif 4"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00180"
FT DOMAIN 370..440
FT /note="S1 motif 5"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00180"
FT DOMAIN 459..530
FT /note="S1 motif 6"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00180"
FT CONFLICT 88
FT /note="A -> R (in Ref. 1; CAA30404)"
FT /evidence="ECO:0000305"
FT CONFLICT 153..162
FT /note="LMHNPQPFEI -> ADAQPAALRN (in Ref. 1; CAA30404)"
FT /evidence="ECO:0000305"
FT CONFLICT 235
FT /note="N -> K (in Ref. 1; CAA30404)"
FT /evidence="ECO:0000305"
FT CONFLICT 241
FT /note="L -> Q (in Ref. 1; CAA30404)"
FT /evidence="ECO:0000305"
FT CONFLICT 551
FT /note="A -> R (in Ref. 1; CAA30404)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 568 AA; 62640 MW; AB0858204273A7B8 CRC64;
MSATNPTRDD FAALLEESFA KTDLAEGYVA KGIVTAIEKD VAIVDVGLKV EGRVPLKEFG
AKAKDGTLKV GDEVEVYVER IENALGEAVL SREKARREES WQRLEVKFEA GERVEGIIFN
QVKGGFTVDL DGAVAFLPRS QVDIRPIRDV TPLMHNPQPF EILKMDKRRG NIVVSRRTVL
EESRAEQRSE IVQNLEEGQV VEGVVKNITD YGAFVDLGGI DGLLHVTDMA WRRVNHPSEI
LNIGQQVKVQ IIRINQETHR ISLGMKQLES DPWDGIGAKY PVGKKISGTV TNITDYGAFV
ELEPGIEGLI HISEMSWTKK NVHPGKILST SQEVDVVVLE VDPTKRRISL GLKQTLENPW
QAFAHSHPAG TEVEGEVKNK TEFGLFIGLD GDVDGMVHLS DLDWNRPGEQ VIEEFNKGDV
VRAVVLDVDV DKERISLGIK QLGRDAVGEA AASGELRKNA VVSAEVIGVN DGGIEVRLVN
HEDVTAFIRR ADLSRDRDEQ RPERFSVGQT VDARVTNFSK KDRKIQLSIK ALEIAEEKEA
VAQFGSSDSG ASLGDILGAA LKNRQNNE
