ID   RS1_RHOPA               Reviewed;         565 AA.
AC   Q6NDP1;
DT   21-FEB-2006, integrated into UniProtKB/Swiss-Prot.
DT   05-JUL-2004, sequence version 1.
DT   03-AUG-2022, entry version 88.
DE   RecName: Full=30S ribosomal protein S1;
DE   AltName: Full=RRP-S1;
GN   Name=rpsA; OrderedLocusNames=RPA0064;
OS   Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
OC   Bradyrhizobiaceae; Rhodopseudomonas.
OX   NCBI_TaxID=258594;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC BAA-98 / CGA009;
RX   PubMed=14704707; DOI=10.1038/nbt923;
RA   Larimer F.W., Chain P., Hauser L., Lamerdin J.E., Malfatti S., Do L.,
RA   Land M.L., Pelletier D.A., Beatty J.T., Lang A.S., Tabita F.R.,
RA   Gibson J.L., Hanson T.E., Bobst C., Torres y Torres J.L., Peres C.,
RA   Harrison F.H., Gibson J., Harwood C.S.;
RT   "Complete genome sequence of the metabolically versatile photosynthetic
RT   bacterium Rhodopseudomonas palustris.";
RL   Nat. Biotechnol. 22:55-61(2004).
RN   [2]
RP   IDENTIFICATION BY MASS SPECTROMETRY.
RC   STRAIN=ATCC BAA-98 / CGA009;
RX   PubMed=15473684; DOI=10.1021/pr049940z;
RA   Strader M.B., VerBerkmoes N.C., Tabb D.L., Connelly H.M., Barton J.W.,
RA   Bruce B.D., Pelletier D.A., Davison B.H., Hettich R.L., Larimer F.W.,
RA   Hurst G.B.;
RT   "Characterization of the 70S ribosome from Rhodopseudomonas palustris using
RT   an integrated 'top-down' and 'bottom-up' mass spectrometric approach.";
RL   J. Proteome Res. 3:965-978(2004).
CC   -!- FUNCTION: Binds mRNA; thus facilitating recognition of the initiation
CC       point. It is needed to translate mRNA with a short Shine-Dalgarno (SD)
CC       purine-rich sequence (By similarity). {ECO:0000250}.
CC   -!- PTM: The initiator methionine may be removed.
CC   -!- SIMILARITY: Belongs to the bacterial ribosomal protein bS1 family.
CC       {ECO:0000305}.
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DR   EMBL; BX572593; CAE25508.1; -; Genomic_DNA.
DR   RefSeq; WP_011155635.1; NC_005296.1.
DR   AlphaFoldDB; Q6NDP1; -.
DR   SMR; Q6NDP1; -.
DR   IntAct; Q6NDP1; 1.
DR   STRING; 258594.RPA0064; -.
DR   PRIDE; Q6NDP1; -.
DR   EnsemblBacteria; CAE25508; CAE25508; RPA0064.
DR   GeneID; 66891065; -.
DR   KEGG; rpa:RPA0064; -.
DR   eggNOG; COG0539; Bacteria.
DR   HOGENOM; CLU_015805_2_1_5; -.
DR   OMA; SLNEFRY; -.
DR   PhylomeDB; Q6NDP1; -.
DR   BioCyc; RPAL258594:TX73_RS00335-MON; -.
DR   Proteomes; UP000001426; Chromosome.
DR   GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR   GO; GO:0006412; P:translation; IEA:InterPro.
DR   Gene3D; 2.40.50.140; -; 5.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR035104; Ribosomal_protein_S1-like.
DR   InterPro; IPR000110; Ribosomal_S1.
DR   InterPro; IPR022967; S1_dom.
DR   InterPro; IPR003029; S1_domain.
DR   PANTHER; PTHR10724:SF7; PTHR10724:SF7; 3.
DR   Pfam; PF00575; S1; 6.
DR   PIRSF; PIRSF002111; RpsA; 1.
DR   PRINTS; PR00681; RIBOSOMALS1.
DR   SMART; SM00316; S1; 6.
DR   SUPFAM; SSF50249; SSF50249; 6.
DR   TIGRFAMs; TIGR00717; rpsA; 1.
DR   PROSITE; PS50126; S1; 6.
PE   1: Evidence at protein level;
KW   Reference proteome; Repeat; Ribonucleoprotein; Ribosomal protein;
KW   RNA-binding.
FT   CHAIN           1..564
FT                   /note="30S ribosomal protein S1"
FT                   /id="PRO_0000224163"
FT   DOMAIN          30..96
FT                   /note="S1 motif 1"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00180"
FT   DOMAIN          114..180
FT                   /note="S1 motif 2"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00180"
FT   DOMAIN          201..269
FT                   /note="S1 motif 3"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00180"
FT   DOMAIN          286..356
FT                   /note="S1 motif 4"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00180"
FT   DOMAIN          373..443
FT                   /note="S1 motif 5"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00180"
FT   DOMAIN          454..529
FT                   /note="S1 motif 6"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00180"
SQ   SEQUENCE   565 AA;  62800 MW;  12493D4C9D6B49E6 CRC64;
     MASTDTYNPT RDDFAAMLDE SFAGGNLQES SVIKGKVVAI EKDMAVIDVG LKTEGRVPLR
     EFAGPGRDNE IKVGDTVEVF LDRIENALGE AVLSRDKARR EESWGKLEKA FQNNEKVFGV
     IFNQVKGGFT VDLDGAVAFL PRSQVDIRPI RDVAPLMNNS QPFQILKMDR RRGNIVVSRR
     TVLEETRAEQ RQELVQNLEE GQVIDGVVKN ITDYGAFVDL GGIDGLLHVT DIAWRRVNHP
     TEVLTIGQTV KVKIIKINHE THRISLGMKQ LLDDPWQGIE AKYPLNARFT GRVTNITDYG
     AFVELEPGIE GLIHVSEMSW TKKNMHPGKI VSTSQEVEVQ VLEVDSVKRR ISLGLKQTMR
     NPWEVFVEKH PVGSTVEGEV KNKTEFGLFL GLDGDVDGMV HLSDLDWKLP GEQVIDNFKK
     GDMVKAVVLD VDVEKERISL GVKQLEGDPF AEPGDVKKGA VVTCEVLDVK ESGIDVQIVG
     TDFNTFIKRS ELARDRNDQR SDRFAVGEKV DARVIQFDKK ARKVQVSIKA LEVAEEKEAI
     AQYGSSDSGA TLGDILGTAL KQRDK