RS20_ORYSJ
ID RS20_ORYSJ Reviewed; 128 AA.
AC P35686; Q0DEU6; Q5VNV9; Q7GC39;
DT 01-JUN-1994, integrated into UniProtKB/Swiss-Prot.
DT 27-JUN-2006, sequence version 2.
DT 03-AUG-2022, entry version 127.
DE RecName: Full=40S ribosomal protein S20;
GN Name=RPS20; OrderedLocusNames=Os06g0134000, LOC_Os06g04290;
GN ORFNames=OsJ_20022 {ECO:0000312|EMBL:EAZ35731.1}, P0001H02.5-1,
GN P0679C08.43-1;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RX PubMed=8218399; DOI=10.1016/0167-4781(93)90044-e;
RA Nishi R., Hashimoto H., Uchimiya H., Kato A.;
RT "The primary structure of two proteins from the small ribosomal subunit of
RT rice.";
RL Biochim. Biophys. Acta 1216:113-114(1993).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RA Wu L., Nagano H., Yoshida K., Kawasaki S., Kishima Y., Sano Y.;
RT "Mapping of the sequences expressed in the rice callus onto a BAC contig:
RT identification of a genomic segment carrying closely linked genes encoding
RT EPSP synthase and rps20.";
RL Submitted (DEC-2000) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [5]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [6]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [7]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uS10 family.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAA02157.1; Type=Erroneous initiation; Evidence={ECO:0000305};
CC Sequence=BAB61063.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR EMBL; D12632; BAA02157.1; ALT_INIT; mRNA.
DR EMBL; AB052962; BAB61063.1; ALT_INIT; Genomic_DNA.
DR EMBL; AP002542; BAD67888.1; -; Genomic_DNA.
DR EMBL; AP004234; BAD68866.1; -; Genomic_DNA.
DR EMBL; AP008212; BAF18627.1; -; Genomic_DNA.
DR EMBL; AP014962; BAS96010.1; -; Genomic_DNA.
DR EMBL; CM000143; EAZ35731.1; -; Genomic_DNA.
DR EMBL; AK062184; BAG88241.1; -; mRNA.
DR EMBL; AK106717; BAG97806.1; -; mRNA.
DR EMBL; AK120319; BAG99964.1; -; mRNA.
DR PIR; S38356; S38356.
DR RefSeq; XP_015643050.1; XM_015787564.1.
DR AlphaFoldDB; P35686; -.
DR SMR; P35686; -.
DR IntAct; P35686; 1.
DR STRING; 4530.OS06T0134000-01; -.
DR PaxDb; P35686; -.
DR PRIDE; P35686; -.
DR EnsemblPlants; Os06t0134000-01; Os06t0134000-01; Os06g0134000.
DR GeneID; 4340027; -.
DR Gramene; Os06t0134000-01; Os06t0134000-01; Os06g0134000.
DR KEGG; osa:4340027; -.
DR eggNOG; KOG0900; Eukaryota.
DR HOGENOM; CLU_122625_0_0_1; -.
DR InParanoid; P35686; -.
DR OMA; MANIKKD; -.
DR OrthoDB; 1454256at2759; -.
DR Proteomes; UP000000763; Chromosome 6.
DR Proteomes; UP000007752; Chromosome 6.
DR Proteomes; UP000059680; Chromosome 6.
DR Genevisible; P35686; OS.
DR GO; GO:0022627; C:cytosolic small ribosomal subunit; IBA:GO_Central.
DR GO; GO:0015935; C:small ribosomal subunit; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR Gene3D; 3.30.70.600; -; 1.
DR HAMAP; MF_00508; Ribosomal_S10; 1.
DR InterPro; IPR001848; Ribosomal_S10.
DR InterPro; IPR018268; Ribosomal_S10_CS.
DR InterPro; IPR027486; Ribosomal_S10_dom.
DR InterPro; IPR036838; Ribosomal_S10_dom_sf.
DR InterPro; IPR005729; Ribosomal_S10_euk/arc.
DR PANTHER; PTHR11700; PTHR11700; 1.
DR Pfam; PF00338; Ribosomal_S10; 1.
DR PRINTS; PR00971; RIBOSOMALS10.
DR SMART; SM01403; Ribosomal_S10; 1.
DR SUPFAM; SSF54999; SSF54999; 1.
DR TIGRFAMs; TIGR01046; uS10_euk_arch; 1.
DR PROSITE; PS00361; RIBOSOMAL_S10; 1.
PE 2: Evidence at transcript level;
KW Reference proteome; Ribonucleoprotein; Ribosomal protein.
FT CHAIN 1..128
FT /note="40S ribosomal protein S20"
FT /id="PRO_0000146690"
SQ SEQUENCE 128 AA; 14046 MW; 8C88ED653B8E48C4 CRC64;
MAAADVAYAP PMKSGKIGFE SSQEVQHRIR ITLSSKSVKN LEKVCGDLVK GAKDKSLKVK
GPVRMPTKVL HITTRKSPCG EGTNTWDRFE MRVHKRVIDL VSSADVVKQI TSITIEPGVE
VEVTISDQ
