RS23_ICTPU
ID RS23_ICTPU Reviewed; 143 AA.
AC Q90YQ1;
DT 05-JUL-2004, integrated into UniProtKB/Swiss-Prot.
DT 01-DEC-2001, sequence version 1.
DT 25-MAY-2022, entry version 74.
DE RecName: Full=40S ribosomal protein S23;
GN Name=rps23;
OS Ictalurus punctatus (Channel catfish) (Silurus punctatus).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes;
OC Ictaluridae; Ictalurus.
OX NCBI_TaxID=7998;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RX PubMed=12095691; DOI=10.1016/s0378-1119(02)00595-4;
RA Karsi A., Patterson A., Feng J., Liu Z.-J.;
RT "Translational machinery of channel catfish: I. A transcriptomic approach
RT to the analysis of 32 40S ribosomal protein genes and their expression.";
RL Gene 291:177-186(2002).
CC -!- SUBUNIT: Component of the 40S small ribosomal subunit.
CC {ECO:0000250|UniProtKB:Q6SA96}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm, cytosol
CC {ECO:0000250|UniProtKB:P62266}. Cytoplasm
CC {ECO:0000250|UniProtKB:P62266}. Rough endoplasmic reticulum
CC {ECO:0000250|UniProtKB:Q6SA96}. Note=Detected on cytosolic polysomes
CC (By similarity). Detected in ribosomes that are associated with the
CC rough endoplasmic reticulum (By similarity).
CC {ECO:0000250|UniProtKB:P62266, ECO:0000250|UniProtKB:Q6SA96}.
CC -!- PTM: Hydroxylation at Pro-62 affects translation termination
CC efficiency. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uS12 family.
CC {ECO:0000305}.
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DR EMBL; AF402831; AAK95205.1; -; mRNA.
DR RefSeq; NP_001187084.1; NM_001200155.1.
DR AlphaFoldDB; Q90YQ1; -.
DR SMR; Q90YQ1; -.
DR STRING; 7998.ENSIPUP00000010510; -.
DR GeneID; 100304573; -.
DR KEGG; ipu:100304573; -.
DR CTD; 6228; -.
DR OrthoDB; 1402984at2759; -.
DR Proteomes; UP000221080; Chromosome 21.
DR GO; GO:0022627; C:cytosolic small ribosomal subunit; ISS:UniProtKB.
DR GO; GO:0042788; C:polysomal ribosome; ISS:UniProtKB.
DR GO; GO:0005791; C:rough endoplasmic reticulum; IEA:UniProtKB-SubCell.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0002181; P:cytoplasmic translation; ISS:UniProtKB.
DR CDD; cd03367; Ribosomal_S23; 1.
DR Gene3D; 2.40.50.140; -; 1.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR006032; Ribosomal_S12/S23.
DR InterPro; IPR005680; Ribosomal_S23_euk/arc.
DR PANTHER; PTHR11652; PTHR11652; 1.
DR Pfam; PF00164; Ribosom_S12_S23; 1.
DR PIRSF; PIRSF002133; Ribosomal_S12/S23; 1.
DR SUPFAM; SSF50249; SSF50249; 1.
DR TIGRFAMs; TIGR00982; uS12_E_A; 1.
DR PROSITE; PS00055; RIBOSOMAL_S12; 1.
PE 2: Evidence at transcript level;
KW Cytoplasm; Endoplasmic reticulum; Hydroxylation; Ribonucleoprotein;
KW Ribosomal protein.
FT CHAIN 1..143
FT /note="40S ribosomal protein S23"
FT /id="PRO_0000146462"
FT REGION 1..27
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..16
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOD_RES 62
FT /note="3-hydroxyproline"
FT /evidence="ECO:0000250"
SQ SEQUENCE 143 AA; 15850 MW; 898CBA2B8C40B6F5 CRC64;
MGKCRGLRTA RKLRDHRREQ KWHDKQYKKA HLGTALKANP FGGASHAKGI VLEKVGVEAK
QPNSAIRKCV RVQLIKNGKK ITAFVPNDGC LNFIEENDEV LVAGFGRKGH AVGDIPGVRF
KVVKVANVSL LALYKGKKER PRS