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RS252_ARATH
ID   RS252_ARATH             Reviewed;         108 AA.
AC   Q9SIK2;
DT   09-MAY-2003, integrated into UniProtKB/Swiss-Prot.
DT   01-MAY-2000, sequence version 1.
DT   25-MAY-2022, entry version 129.
DE   RecName: Full=40S ribosomal protein S25-2;
GN   Name=RPS25B; OrderedLocusNames=At2g21580; ORFNames=F2G1.15;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=10617197; DOI=10.1038/45471;
RA   Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA   Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA   Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA   Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA   Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA   Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA   Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT   "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL   Nature 402:761-768(1999).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=14593172; DOI=10.1126/science.1088305;
RA   Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA   Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA   Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA   Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA   Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA   Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA   Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA   Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA   Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA   Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA   Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA   Ecker J.R.;
RT   "Empirical analysis of transcriptional activity in the Arabidopsis
RT   genome.";
RL   Science 302:842-846(2003).
RN   [4]
RP   GENE FAMILY ORGANIZATION, AND NOMENCLATURE.
RX   PubMed=11598216; DOI=10.1104/pp.010265;
RA   Barakat A., Szick-Miranda K., Chang I.-F., Guyot R., Blanc G., Cooke R.,
RA   Delseny M., Bailey-Serres J.;
RT   "The organization of cytoplasmic ribosomal protein genes in the Arabidopsis
RT   genome.";
RL   Plant Physiol. 127:398-415(2001).
CC   -!- ALTERNATIVE PRODUCTS:
CC       Event=Alternative splicing; Named isoforms=1;
CC         Comment=A number of isoforms are produced. According to EST
CC         sequences.;
CC       Name=1;
CC         IsoId=Q9SIK2-1; Sequence=Displayed;
CC   -!- SIMILARITY: Belongs to the eukaryotic ribosomal protein eS25 family.
CC       {ECO:0000305}.
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DR   EMBL; AC007119; AAD23647.1; -; Genomic_DNA.
DR   EMBL; CP002685; AEC07197.1; -; Genomic_DNA.
DR   EMBL; AY048211; AAK82474.1; -; mRNA.
DR   EMBL; AY091695; AAM10294.1; -; mRNA.
DR   PIR; H84602; H84602.
DR   RefSeq; NP_179752.1; NM_127729.4. [Q9SIK2-1]
DR   AlphaFoldDB; Q9SIK2; -.
DR   SMR; Q9SIK2; -.
DR   BioGRID; 2049; 14.
DR   STRING; 3702.AT2G21580.1; -.
DR   iPTMnet; Q9SIK2; -.
DR   MetOSite; Q9SIK2; -.
DR   PaxDb; Q9SIK2; -.
DR   PRIDE; Q9SIK2; -.
DR   EnsemblPlants; AT2G21580.1; AT2G21580.1; AT2G21580. [Q9SIK2-1]
DR   GeneID; 816696; -.
DR   Gramene; AT2G21580.1; AT2G21580.1; AT2G21580. [Q9SIK2-1]
DR   KEGG; ath:AT2G21580; -.
DR   Araport; AT2G21580; -.
DR   TAIR; locus:2049369; AT2G21580.
DR   eggNOG; KOG1767; Eukaryota.
DR   HOGENOM; CLU_129470_0_1_1; -.
DR   InParanoid; Q9SIK2; -.
DR   PhylomeDB; Q9SIK2; -.
DR   PRO; PR:Q9SIK2; -.
DR   Proteomes; UP000006548; Chromosome 2.
DR   ExpressionAtlas; Q9SIK2; baseline and differential.
DR   Genevisible; Q9SIK2; AT.
DR   GO; GO:0022626; C:cytosolic ribosome; HDA:TAIR.
DR   GO; GO:0022627; C:cytosolic small ribosomal subunit; HDA:TAIR.
DR   GO; GO:0000325; C:plant-type vacuole; HDA:TAIR.
DR   GO; GO:0009506; C:plasmodesma; HDA:TAIR.
DR   GO; GO:0042788; C:polysomal ribosome; IDA:CAFA.
DR   GO; GO:0005773; C:vacuole; HDA:TAIR.
DR   GO; GO:0003729; F:mRNA binding; IDA:TAIR.
DR   GO; GO:0003735; F:structural constituent of ribosome; IDA:CAFA.
DR   InterPro; IPR004977; Ribosomal_S25.
DR   PANTHER; PTHR12850; PTHR12850; 1.
DR   Pfam; PF03297; Ribosomal_S25; 1.
PE   3: Inferred from homology;
KW   Alternative splicing; Reference proteome; Ribonucleoprotein;
KW   Ribosomal protein.
FT   CHAIN           1..108
FT                   /note="40S ribosomal protein S25-2"
FT                   /id="PRO_0000192882"
FT   REGION          1..36
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   108 AA;  12069 MW;  F9B2BCD5ABE24A84 CRC64;
     MAPKKDKVPP PSSKPAKSGG GKQKKKKWSK GKQKEKVNNM VLFDQGTYDK LLTEAPKFKL
     ITPSILSDRM RINGSLARRA IRELMAKGLI RMVSAHSSQQ IYTRATNT
 
 
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