RS271_ARATH
ID RS271_ARATH Reviewed; 84 AA.
AC O64650;
DT 30-AUG-2005, integrated into UniProtKB/Swiss-Prot.
DT 01-AUG-1998, sequence version 1.
DT 25-MAY-2022, entry version 137.
DE RecName: Full=40S ribosomal protein S27-1;
GN Name=RPS27A; Synonyms=ARS27C; OrderedLocusNames=At2g45710;
GN ORFNames=F17K2.35, F4I18.31;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP IDENTIFICATION.
RX PubMed=9889204; DOI=10.1093/emboj/18.2.490;
RA Revenkova E., Masson J., Koncz C., Afsar K., Jakovleva L., Paszkowski J.;
RT "Involvement of Arabidopsis thaliana ribosomal protein S27 in mRNA
RT degradation triggered by genotoxic stress.";
RL EMBO J. 18:490-499(1999).
RN [6]
RP GENE FAMILY ORGANIZATION, AND NOMENCLATURE.
RX PubMed=11598216; DOI=10.1104/pp.010265;
RA Barakat A., Szick-Miranda K., Chang I.-F., Guyot R., Blanc G., Cooke R.,
RA Delseny M., Bailey-Serres J.;
RT "The organization of cytoplasmic ribosomal protein genes in the Arabidopsis
RT genome.";
RL Plant Physiol. 127:398-415(2001).
CC -!- COFACTOR:
CC Name=Zn(2+); Xref=ChEBI:CHEBI:29105; Evidence={ECO:0000305};
CC Note=Binds 1 zinc ion per subunit. {ECO:0000305};
CC -!- SIMILARITY: Belongs to the eukaryotic ribosomal protein eS27 family.
CC {ECO:0000305}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AC003680; AAM14895.1; -; Genomic_DNA.
DR EMBL; AC004665; AAC28554.1; -; Genomic_DNA.
DR EMBL; CP002685; AEC10590.1; -; Genomic_DNA.
DR EMBL; AY072376; AAL62368.1; -; mRNA.
DR EMBL; BT000089; AAN15408.1; -; mRNA.
DR EMBL; AY085824; AAM63040.1; -; mRNA.
DR PIR; T00884; T02476.
DR RefSeq; NP_182095.1; NM_130134.4.
DR AlphaFoldDB; O64650; -.
DR SMR; O64650; -.
DR BioGRID; 4515; 9.
DR STRING; 3702.AT2G45710.1; -.
DR iPTMnet; O64650; -.
DR PaxDb; O64650; -.
DR PRIDE; O64650; -.
DR EnsemblPlants; AT2G45710.1; AT2G45710.1; AT2G45710.
DR GeneID; 819179; -.
DR Gramene; AT2G45710.1; AT2G45710.1; AT2G45710.
DR KEGG; ath:AT2G45710; -.
DR Araport; AT2G45710; -.
DR TAIR; locus:2050756; AT2G45710.
DR eggNOG; KOG1779; Eukaryota.
DR HOGENOM; CLU_130128_3_0_1; -.
DR InParanoid; O64650; -.
DR OMA; NCQTLLC; -.
DR OrthoDB; 1537724at2759; -.
DR PhylomeDB; O64650; -.
DR PRO; PR:O64650; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; O64650; baseline and differential.
DR Genevisible; O64650; AT.
DR GO; GO:0022626; C:cytosolic ribosome; HDA:TAIR.
DR GO; GO:0022627; C:cytosolic small ribosomal subunit; HDA:TAIR.
DR GO; GO:0005730; C:nucleolus; HDA:TAIR.
DR GO; GO:0009506; C:plasmodesma; HDA:TAIR.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003729; F:mRNA binding; IDA:TAIR.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0003735; F:structural constituent of ribosome; IDA:CAFA.
DR GO; GO:0000028; P:ribosomal small subunit assembly; IBA:GO_Central.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR Gene3D; 2.20.25.100; -; 1.
DR HAMAP; MF_00371; Ribosomal_S27e; 1.
DR InterPro; IPR000592; Ribosomal_S27.
DR InterPro; IPR023407; Ribosomal_S27_Zn-bd_dom_sf.
DR InterPro; IPR011332; Ribosomal_zn-bd.
DR PANTHER; PTHR11594; PTHR11594; 1.
DR Pfam; PF01667; Ribosomal_S27e; 1.
DR SUPFAM; SSF57829; SSF57829; 1.
DR PROSITE; PS01168; RIBOSOMAL_S27E; 1.
PE 3: Inferred from homology;
KW Metal-binding; Reference proteome; Ribonucleoprotein; Ribosomal protein;
KW Zinc; Zinc-finger.
FT CHAIN 1..84
FT /note="40S ribosomal protein S27-1"
FT /id="PRO_0000149059"
FT ZN_FING 39..61
FT /note="C4-type"
FT /evidence="ECO:0000255"
SQ SEQUENCE 84 AA; 9405 MW; C7AACBFCC60885BA CRC64;
MVLQNDIDLL NPPAELEKRK HKLKRLVQSP NSFFMDVKCQ GCFNITTVFS HSQTVVMCGN
CQTLLCTPTG GKAKLTEGCS FRKK