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RS28_DANRE
ID   RS28_DANRE              Reviewed;          69 AA.
AC   Q6PBK3;
DT   16-AUG-2004, integrated into UniProtKB/Swiss-Prot.
DT   05-JUL-2004, sequence version 1.
DT   03-AUG-2022, entry version 101.
DE   RecName: Full=40S ribosomal protein S28;
GN   Name=rps28; ORFNames=zgc:73367;
OS   Danio rerio (Zebrafish) (Brachydanio rerio).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC   Danionidae; Danioninae; Danio.
OX   NCBI_TaxID=7955;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   TISSUE=Retina;
RG   NIH - Zebrafish Gene Collection (ZGC) project;
RL   Submitted (OCT-2003) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBUNIT: Component of the 40S small ribosomal subunit.
CC       {ECO:0000250|UniProtKB:Q6QAT1}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm, cytosol
CC       {ECO:0000250|UniProtKB:P62857}. Cytoplasm
CC       {ECO:0000250|UniProtKB:P62857}. Rough endoplasmic reticulum
CC       {ECO:0000250|UniProtKB:Q6QAT1}. Note=Detected on cytosolic polysomes
CC       (By similarity). Detected in ribosomes that are associated with the
CC       rough endoplasmic reticulum (By similarity).
CC       {ECO:0000250|UniProtKB:P62857, ECO:0000250|UniProtKB:Q6QAT1}.
CC   -!- SIMILARITY: Belongs to the eukaryotic ribosomal protein eS28 family.
CC       {ECO:0000305}.
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DR   EMBL; BC059677; AAH59677.1; -; mRNA.
DR   RefSeq; NP_998199.1; NM_213034.3.
DR   AlphaFoldDB; Q6PBK3; -.
DR   SMR; Q6PBK3; -.
DR   STRING; 7955.ENSDARP00000115796; -.
DR   PaxDb; Q6PBK3; -.
DR   PRIDE; Q6PBK3; -.
DR   Ensembl; ENSDART00000052063; ENSDARP00000052062; ENSDARG00000035860.
DR   Ensembl; ENSDART00000133109; ENSDARP00000115796; ENSDARG00000035860.
DR   GeneID; 406307; -.
DR   KEGG; dre:406307; -.
DR   CTD; 6234; -.
DR   ZFIN; ZDB-GENE-030131-2022; rps28.
DR   eggNOG; KOG3502; Eukaryota.
DR   GeneTree; ENSGT00910000144227; -.
DR   HOGENOM; CLU_178987_1_0_1; -.
DR   InParanoid; Q6PBK3; -.
DR   OMA; MHGEASQ; -.
DR   OrthoDB; 1578965at2759; -.
DR   PhylomeDB; Q6PBK3; -.
DR   TreeFam; TF300136; -.
DR   Reactome; R-DRE-156827; L13a-mediated translational silencing of Ceruloplasmin expression.
DR   Reactome; R-DRE-1799339; SRP-dependent cotranslational protein targeting to membrane.
DR   Reactome; R-DRE-6791226; Major pathway of rRNA processing in the nucleolus and cytosol.
DR   Reactome; R-DRE-72649; Translation initiation complex formation.
DR   Reactome; R-DRE-72689; Formation of a pool of free 40S subunits.
DR   Reactome; R-DRE-72695; Formation of the ternary complex, and subsequently, the 43S complex.
DR   Reactome; R-DRE-72702; Ribosomal scanning and start codon recognition.
DR   Reactome; R-DRE-72706; GTP hydrolysis and joining of the 60S ribosomal subunit.
DR   Reactome; R-DRE-975956; Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
DR   Reactome; R-DRE-975957; Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).
DR   PRO; PR:Q6PBK3; -.
DR   Proteomes; UP000000437; Genome assembly.
DR   Proteomes; UP000814640; Chromosome 2.
DR   Bgee; ENSDARG00000035860; Expressed in tail and 23 other tissues.
DR   ExpressionAtlas; Q6PBK3; baseline and differential.
DR   GO; GO:0098556; C:cytoplasmic side of rough endoplasmic reticulum membrane; ISS:UniProtKB.
DR   GO; GO:0022627; C:cytosolic small ribosomal subunit; ISS:UniProtKB.
DR   GO; GO:0042788; C:polysomal ribosome; ISS:UniProtKB.
DR   GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR   GO; GO:0002181; P:cytoplasmic translation; ISS:UniProtKB.
DR   GO; GO:0030490; P:maturation of SSU-rRNA; IBA:GO_Central.
DR   GO; GO:0000028; P:ribosomal small subunit assembly; IBA:GO_Central.
DR   CDD; cd04457; S1_S28E; 1.
DR   Gene3D; 2.40.50.140; -; 1.
DR   HAMAP; MF_00292; Ribosomal_S28e; 1.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR000289; Ribosomal_S28e.
DR   InterPro; IPR028626; Ribosomal_S28e_CS.
DR   PANTHER; PTHR10769; PTHR10769; 1.
DR   Pfam; PF01200; Ribosomal_S28e; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   PROSITE; PS00961; RIBOSOMAL_S28E; 1.
PE   3: Inferred from homology;
KW   Acetylation; Cytoplasm; Endoplasmic reticulum; Reference proteome;
KW   Ribonucleoprotein; Ribosomal protein.
FT   CHAIN           1..69
FT                   /note="40S ribosomal protein S28"
FT                   /id="PRO_0000136826"
FT   MOD_RES         1
FT                   /note="N-acetylmethionine"
FT                   /evidence="ECO:0000250"
SQ   SEQUENCE   69 AA;  7824 MW;  B62523854772C7E9 CRC64;
     MDASRVQPIK LARVTKVLGR TGSQGQCTQV RVEFMDDSNR SIIRNVKGPV REGDVLTLLE
     SEREARRLR
 
 
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