RS28_PYRHO
ID RS28_PYRHO Reviewed; 71 AA.
AC P61030; O74014;
DT 26-APR-2004, integrated into UniProtKB/Swiss-Prot.
DT 26-APR-2004, sequence version 1.
DT 25-MAY-2022, entry version 97.
DE RecName: Full=30S ribosomal protein S28e;
GN Name=rps28e; OrderedLocusNames=PH1495.2; ORFNames=PHS040;
OS Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC
OS 100139 / OT-3).
OC Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae;
OC Pyrococcus.
OX NCBI_TaxID=70601;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3;
RX PubMed=9679194; DOI=10.1093/dnares/5.2.55;
RA Kawarabayasi Y., Sawada M., Horikawa H., Haikawa Y., Hino Y., Yamamoto S.,
RA Sekine M., Baba S., Kosugi H., Hosoyama A., Nagai Y., Sakai M., Ogura K.,
RA Otsuka R., Nakazawa H., Takamiya M., Ohfuku Y., Funahashi T., Tanaka T.,
RA Kudoh Y., Yamazaki J., Kushida N., Oguchi A., Aoki K., Yoshizawa T.,
RA Nakamura Y., Robb F.T., Horikoshi K., Masuchi Y., Shizuya H., Kikuchi H.;
RT "Complete sequence and gene organization of the genome of a hyper-
RT thermophilic archaebacterium, Pyrococcus horikoshii OT3.";
RL DNA Res. 5:55-76(1998).
RN [2]
RP STRUCTURE BY NMR.
RX PubMed=14627742; DOI=10.1110/ps.03359003;
RA Aramini J.M., Huang Y.J., Cort J.R., Goldsmith-Fischman S., Xiao R.,
RA Shih L.Y., Ho C.K., Liu J., Rost B., Honig B., Kennedy M.A., Acton T.B.,
RA Montelione G.T.;
RT "Solution NMR structure of the 30S ribosomal protein S28E from Pyrococcus
RT horikoshii.";
RL Protein Sci. 12:2823-2830(2003).
CC -!- SIMILARITY: Belongs to the eukaryotic ribosomal protein eS28 family.
CC {ECO:0000305}.
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DR EMBL; BA000001; BAA30603.1; -; Genomic_DNA.
DR PIR; C71025; C71025.
DR RefSeq; WP_010867791.1; NC_000961.1.
DR PDB; 1NY4; NMR; -; A=1-71.
DR PDBsum; 1NY4; -.
DR AlphaFoldDB; P61030; -.
DR SMR; P61030; -.
DR STRING; 70601.3257920; -.
DR EnsemblBacteria; BAA30603; BAA30603; BAA30603.
DR GeneID; 33322496; -.
DR KEGG; pho:PHS040; -.
DR eggNOG; arCOG04314; Archaea.
DR OMA; MHGEASQ; -.
DR OrthoDB; 121548at2157; -.
DR EvolutionaryTrace; P61030; -.
DR Proteomes; UP000000752; Chromosome.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR CDD; cd04457; S1_S28E; 1.
DR Gene3D; 2.40.50.140; -; 1.
DR HAMAP; MF_00292; Ribosomal_S28e; 1.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR000289; Ribosomal_S28e.
DR InterPro; IPR028626; Ribosomal_S28e_CS.
DR PANTHER; PTHR10769; PTHR10769; 1.
DR Pfam; PF01200; Ribosomal_S28e; 1.
DR SUPFAM; SSF50249; SSF50249; 1.
DR PROSITE; PS00961; RIBOSOMAL_S28E; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Ribonucleoprotein; Ribosomal protein.
FT CHAIN 1..71
FT /note="30S ribosomal protein S28e"
FT /id="PRO_0000136858"
FT STRAND 8..14
FT /evidence="ECO:0007829|PDB:1NY4"
FT STRAND 20..36
FT /evidence="ECO:0007829|PDB:1NY4"
FT STRAND 40..47
FT /evidence="ECO:0007829|PDB:1NY4"
FT STRAND 54..56
FT /evidence="ECO:0007829|PDB:1NY4"
SQ SEQUENCE 71 AA; 8086 MW; 59D9E88DF6923097 CRC64;
MAEDEGYPAE VIEIIGRTGT TGDVTQVKVR ILEGRDKGRV IRRNVRGPVR VGDILILRET
EREAREIKSR R
