RS29_RAT
ID RS29_RAT Reviewed; 56 AA.
AC P62275; P30054;
DT 05-JUL-2004, integrated into UniProtKB/Swiss-Prot.
DT 23-JAN-2007, sequence version 2.
DT 03-AUG-2022, entry version 115.
DE RecName: Full=40S ribosomal protein S29;
GN Name=Rps29;
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Rattus.
OX NCBI_TaxID=10116;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], AND PROTEIN SEQUENCE OF 2-56.
RC STRAIN=Sprague-Dawley; TISSUE=Liver;
RX PubMed=8441676; DOI=10.1093/nar/21.3.649;
RA Chan Y.-L., Suzuki K., Olvera J., Wool I.G.;
RT "Zinc finger-like motifs in rat ribosomal proteins S27 and S29.";
RL Nucleic Acids Res. 21:649-655(1993).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Pituitary;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
CC -!- COFACTOR:
CC Name=Zn(2+); Xref=ChEBI:CHEBI:29105;
CC Evidence={ECO:0000250|UniProtKB:P62273};
CC Note=Binds 1 zinc ion per subunit. {ECO:0000250|UniProtKB:P62273};
CC -!- SUBUNIT: Component of the 40S small ribosomal subunit.
CC {ECO:0000250|UniProtKB:Q6QAP6}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm, cytosol
CC {ECO:0000250|UniProtKB:P62273}. Cytoplasm
CC {ECO:0000250|UniProtKB:P62273}. Rough endoplasmic reticulum
CC {ECO:0000250|UniProtKB:Q6QAP6}. Note=Detected on cytosolic polysomes
CC (By similarity). Detected in ribosomes that are associated with the
CC rough endoplasmic reticulum (By similarity).
CC {ECO:0000250|UniProtKB:P62273, ECO:0000250|UniProtKB:Q6QAP6}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uS14 family.
CC {ECO:0000305}.
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DR EMBL; X59051; CAA41778.1; -; mRNA.
DR EMBL; BC058150; AAH58150.1; -; mRNA.
DR PIR; S30298; S30298.
DR RefSeq; NP_037008.1; NM_012876.1.
DR RefSeq; XP_017447740.1; XM_017592251.1.
DR RefSeq; XP_017450716.1; XM_017595227.1.
DR RefSeq; XP_017454537.1; XM_017599048.1.
DR RefSeq; XP_017458134.1; XM_017602645.1.
DR RefSeq; XP_017458926.1; XM_017603437.1.
DR RefSeq; XP_017460190.1; XM_017604701.1.
DR AlphaFoldDB; P62275; -.
DR SMR; P62275; -.
DR BioGRID; 247387; 1.
DR STRING; 10116.ENSRNOP00000005577; -.
DR iPTMnet; P62275; -.
DR PhosphoSitePlus; P62275; -.
DR jPOST; P62275; -.
DR PaxDb; P62275; -.
DR PRIDE; P62275; -.
DR Ensembl; ENSRNOT00000005577; ENSRNOP00000005577; ENSRNOG00000004196.
DR Ensembl; ENSRNOT00000041384; ENSRNOP00000044909; ENSRNOG00000028939.
DR GeneID; 108350501; -.
DR GeneID; 108351482; -.
DR GeneID; 108352650; -.
DR GeneID; 25348; -.
DR KEGG; rno:108350501; -.
DR KEGG; rno:108351482; -.
DR KEGG; rno:108352650; -.
DR KEGG; rno:25348; -.
DR UCSC; RGD:3596; rat.
DR CTD; 6235; -.
DR RGD; 3596; Rps29.
DR VEuPathDB; HostDB:ENSRNOG00000068233; -.
DR VEuPathDB; HostDB:ENSRNOG00000068524; -.
DR eggNOG; KOG3506; Eukaryota.
DR GeneTree; ENSGT00940000154720; -.
DR GeneTree; ENSGT00940000161931; -.
DR HOGENOM; CLU_177289_1_1_1; -.
DR InParanoid; P62275; -.
DR OMA; HCFREIA; -.
DR OrthoDB; 1635465at2759; -.
DR PhylomeDB; P62275; -.
DR TreeFam; TF300217; -.
DR Reactome; R-RNO-156827; L13a-mediated translational silencing of Ceruloplasmin expression.
DR Reactome; R-RNO-1799339; SRP-dependent cotranslational protein targeting to membrane.
DR Reactome; R-RNO-6791226; Major pathway of rRNA processing in the nucleolus and cytosol.
DR Reactome; R-RNO-72649; Translation initiation complex formation.
DR Reactome; R-RNO-72689; Formation of a pool of free 40S subunits.
DR Reactome; R-RNO-72695; Formation of the ternary complex, and subsequently, the 43S complex.
DR Reactome; R-RNO-72702; Ribosomal scanning and start codon recognition.
DR Reactome; R-RNO-72706; GTP hydrolysis and joining of the 60S ribosomal subunit.
DR Reactome; R-RNO-975956; Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
DR Reactome; R-RNO-975957; Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).
DR PRO; PR:P62275; -.
DR Proteomes; UP000002494; Chromosome 13.
DR Proteomes; UP000002494; Chromosome 6.
DR Bgee; ENSRNOG00000004196; Expressed in thymus and 19 other tissues.
DR Genevisible; P62275; RN.
DR GO; GO:0022627; C:cytosolic small ribosomal subunit; IDA:RGD.
DR GO; GO:0042788; C:polysomal ribosome; ISS:UniProtKB.
DR GO; GO:0005791; C:rough endoplasmic reticulum; IEA:UniProtKB-SubCell.
DR GO; GO:0003735; F:structural constituent of ribosome; ISO:RGD.
DR GO; GO:0008270; F:zinc ion binding; ISS:UniProtKB.
DR GO; GO:0002181; P:cytoplasmic translation; ISS:UniProtKB.
DR GO; GO:0043065; P:positive regulation of apoptotic process; IDA:RGD.
DR Gene3D; 4.10.830.10; -; 1.
DR InterPro; IPR039744; 40S_S29/30S_S14z.
DR InterPro; IPR001209; Ribosomal_S14.
DR InterPro; IPR043140; Ribosomal_S14/S29.
DR InterPro; IPR018271; Ribosomal_S14_CS.
DR PANTHER; PTHR12010; PTHR12010; 1.
DR Pfam; PF00253; Ribosomal_S14; 1.
DR PROSITE; PS00527; RIBOSOMAL_S14; 1.
PE 1: Evidence at protein level;
KW Acetylation; Cytoplasm; Direct protein sequencing; Endoplasmic reticulum;
KW Metal-binding; Methylation; Phosphoprotein; Reference proteome;
KW Ribonucleoprotein; Ribosomal protein; Zinc.
FT INIT_MET 1
FT /note="Removed"
FT /evidence="ECO:0000269|PubMed:8441676"
FT CHAIN 2..56
FT /note="40S ribosomal protein S29"
FT /id="PRO_0000131022"
FT BINDING 21
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000255"
FT BINDING 24
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000255"
FT BINDING 39
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000255"
FT BINDING 42
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000255"
FT MOD_RES 9
FT /note="Phosphoserine"
FT /evidence="ECO:0000250|UniProtKB:P62273"
FT MOD_RES 12
FT /note="Omega-N-methylarginine"
FT /evidence="ECO:0000250|UniProtKB:P62273"
FT MOD_RES 48
FT /note="N6-acetyllysine"
FT /evidence="ECO:0000250|UniProtKB:P62273"
SQ SEQUENCE 56 AA; 6677 MW; 41325122B493EFF9 CRC64;
MGHQQLYWSH PRKFGQGSRS CRVCSNRHGL IRKYGLNMCR QCFRQYAKDI GFIKLD
