RS4E_METJA
ID RS4E_METJA Reviewed; 244 AA.
AC P54039;
DT 01-OCT-1996, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-1996, sequence version 1.
DT 25-MAY-2022, entry version 112.
DE RecName: Full=30S ribosomal protein S4e;
GN Name=rps4e; OrderedLocusNames=MJ0468;
OS Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
OS 10045 / NBRC 100440) (Methanococcus jannaschii).
OC Archaea; Euryarchaeota; Methanomada group; Methanococci; Methanococcales;
OC Methanocaldococcaceae; Methanocaldococcus.
OX NCBI_TaxID=243232;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440;
RX PubMed=8688087; DOI=10.1126/science.273.5278.1058;
RA Bult C.J., White O., Olsen G.J., Zhou L., Fleischmann R.D., Sutton G.G.,
RA Blake J.A., FitzGerald L.M., Clayton R.A., Gocayne J.D., Kerlavage A.R.,
RA Dougherty B.A., Tomb J.-F., Adams M.D., Reich C.I., Overbeek R.,
RA Kirkness E.F., Weinstock K.G., Merrick J.M., Glodek A., Scott J.L.,
RA Geoghagen N.S.M., Weidman J.F., Fuhrmann J.L., Nguyen D., Utterback T.R.,
RA Kelley J.M., Peterson J.D., Sadow P.W., Hanna M.C., Cotton M.D.,
RA Roberts K.M., Hurst M.A., Kaine B.P., Borodovsky M., Klenk H.-P.,
RA Fraser C.M., Smith H.O., Woese C.R., Venter J.C.;
RT "Complete genome sequence of the methanogenic archaeon, Methanococcus
RT jannaschii.";
RL Science 273:1058-1073(1996).
CC -!- SIMILARITY: Belongs to the eukaryotic ribosomal protein eS4 family.
CC {ECO:0000305}.
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DR EMBL; L77117; AAB98457.1; -; Genomic_DNA.
DR PIR; D64358; D64358.
DR RefSeq; WP_010869968.1; NC_000909.1.
DR AlphaFoldDB; P54039; -.
DR SMR; P54039; -.
DR STRING; 243232.MJ_0468; -.
DR EnsemblBacteria; AAB98457; AAB98457; MJ_0468.
DR GeneID; 1451330; -.
DR KEGG; mja:MJ_0468; -.
DR eggNOG; arCOG04093; Archaea.
DR HOGENOM; CLU_060400_0_0_2; -.
DR InParanoid; P54039; -.
DR OMA; FPVGLMD; -.
DR OrthoDB; 89943at2157; -.
DR PhylomeDB; P54039; -.
DR Proteomes; UP000000805; Chromosome.
DR GO; GO:0022627; C:cytosolic small ribosomal subunit; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0006412; P:translation; IBA:GO_Central.
DR CDD; cd06087; KOW_RPS4; 1.
DR CDD; cd00165; S4; 1.
DR Gene3D; 2.30.30.30; -; 1.
DR Gene3D; 2.40.50.740; -; 1.
DR Gene3D; 3.10.290.10; -; 1.
DR HAMAP; MF_00485; Ribosomal_S4e; 1.
DR InterPro; IPR005824; KOW.
DR InterPro; IPR041982; KOW_RPS4.
DR InterPro; IPR014722; Rib_L2_dom2.
DR InterPro; IPR000876; Ribosomal_S4e.
DR InterPro; IPR013845; Ribosomal_S4e_central_region.
DR InterPro; IPR038237; Ribosomal_S4e_central_sf.
DR InterPro; IPR013843; Ribosomal_S4e_N.
DR InterPro; IPR018199; Ribosomal_S4e_N_CS.
DR InterPro; IPR002942; S4_RNA-bd.
DR InterPro; IPR036986; S4_RNA-bd_sf.
DR PANTHER; PTHR11581; PTHR11581; 1.
DR Pfam; PF00900; Ribosomal_S4e; 1.
DR Pfam; PF08071; RS4NT; 1.
DR Pfam; PF01479; S4; 1.
DR PIRSF; PIRSF002116; Ribosomal_S4; 1.
DR SMART; SM00739; KOW; 1.
DR SMART; SM00363; S4; 1.
DR PROSITE; PS00528; RIBOSOMAL_S4E; 1.
DR PROSITE; PS50889; S4; 1.
PE 3: Inferred from homology;
KW Reference proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding;
KW rRNA-binding.
FT CHAIN 1..244
FT /note="30S ribosomal protein S4e"
FT /id="PRO_0000130849"
FT DOMAIN 43..108
FT /note="S4 RNA-binding"
SQ SEQUENCE 244 AA; 27659 MW; 6759485019B86AC7 CRC64;
MAKKGPKRHL KRLAAPVRWE LPRKIHKFTV RPLPGAHPMS ESLPLLLIVR DILKYADNAR
EAKKIIKMGK VLVDGRVRKE EKLPVGLMDV VSLPDANENY RVLFDRKGRI KLKPTENPDV
KLCKIKNKTV IKGGHIQLNL HDGRNIVIKV SDPTKAEEDV YKTGDTLLIS IPEQEIKAHI
PFEVGKLAYI TGGKHVGDFA KIVEIERRGI YPDIVTLENM DGEKFKTVKD YVFVVGDEEP
IIKL