RS4E_PYRFU
ID RS4E_PYRFU Reviewed; 243 AA.
AC Q8U011;
DT 02-AUG-2002, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2002, sequence version 1.
DT 25-MAY-2022, entry version 100.
DE RecName: Full=30S ribosomal protein S4e {ECO:0000255|HAMAP-Rule:MF_00485};
DE AltName: Full=Small ribosomal subunit protein eS4;
GN Name=rps4e {ECO:0000255|HAMAP-Rule:MF_00485}; OrderedLocusNames=PF1812;
OS Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1).
OC Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae;
OC Pyrococcus.
OX NCBI_TaxID=186497;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 43587 / DSM 3638 / JCM 8422 / Vc1;
RX PubMed=10430560; DOI=10.1093/genetics/152.4.1299;
RA Maeder D.L., Weiss R.B., Dunn D.M., Cherry J.L., Gonzalez J.M.,
RA DiRuggiero J., Robb F.T.;
RT "Divergence of the hyperthermophilic archaea Pyrococcus furiosus and P.
RT horikoshii inferred from complete genomic sequences.";
RL Genetics 152:1299-1305(1999).
RN [2] {ECO:0007744|PDB:4V6U}
RP STRUCTURE BY ELECTRON MICROSCOPY (6.60 ANGSTROMS) IN THE 70S RIBOSOME, AND
RP SUBUNIT.
RX PubMed=23222135; DOI=10.1093/nar/gks1259;
RA Armache J.P., Anger A.M., Marquez V., Franckenberg S., Frohlich T.,
RA Villa E., Berninghausen O., Thomm M., Arnold G.J., Beckmann R.,
RA Wilson D.N.;
RT "Promiscuous behaviour of archaeal ribosomal proteins: implications for
RT eukaryotic ribosome evolution.";
RL Nucleic Acids Res. 41:1284-1293(2013).
CC -!- SUBUNIT: Part of the 30S ribosomal subunit.
CC {ECO:0000269|PubMed:23222135}.
CC -!- SIMILARITY: Belongs to the eukaryotic ribosomal protein eS4 family.
CC {ECO:0000255|HAMAP-Rule:MF_00485}.
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DR EMBL; AE009950; AAL81936.1; -; Genomic_DNA.
DR RefSeq; WP_011012953.1; NZ_CP023154.1.
DR PDB; 4V6U; EM; 6.60 A; AE=1-243.
DR PDB; 5JB3; EM; 5.34 A; E=1-243.
DR PDB; 5JBH; EM; 5.34 A; E=1-243.
DR PDBsum; 4V6U; -.
DR PDBsum; 5JB3; -.
DR PDBsum; 5JBH; -.
DR AlphaFoldDB; Q8U011; -.
DR SMR; Q8U011; -.
DR STRING; 186497.PF1812; -.
DR EnsemblBacteria; AAL81936; AAL81936; PF1812.
DR GeneID; 41713631; -.
DR KEGG; pfu:PF1812; -.
DR PATRIC; fig|186497.12.peg.1883; -.
DR eggNOG; arCOG04093; Archaea.
DR HOGENOM; CLU_060400_0_0_2; -.
DR OMA; FPVGLMD; -.
DR OrthoDB; 89943at2157; -.
DR PhylomeDB; Q8U011; -.
DR Proteomes; UP000001013; Chromosome.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR CDD; cd06087; KOW_RPS4; 1.
DR CDD; cd00165; S4; 1.
DR Gene3D; 2.30.30.30; -; 1.
DR Gene3D; 2.40.50.740; -; 1.
DR Gene3D; 3.10.290.10; -; 1.
DR HAMAP; MF_00485; Ribosomal_S4e; 1.
DR InterPro; IPR005824; KOW.
DR InterPro; IPR041982; KOW_RPS4.
DR InterPro; IPR014722; Rib_L2_dom2.
DR InterPro; IPR000876; Ribosomal_S4e.
DR InterPro; IPR013845; Ribosomal_S4e_central_region.
DR InterPro; IPR038237; Ribosomal_S4e_central_sf.
DR InterPro; IPR013843; Ribosomal_S4e_N.
DR InterPro; IPR018199; Ribosomal_S4e_N_CS.
DR InterPro; IPR002942; S4_RNA-bd.
DR InterPro; IPR036986; S4_RNA-bd_sf.
DR PANTHER; PTHR11581; PTHR11581; 1.
DR Pfam; PF00900; Ribosomal_S4e; 1.
DR Pfam; PF08071; RS4NT; 1.
DR Pfam; PF01479; S4; 1.
DR PIRSF; PIRSF002116; Ribosomal_S4; 1.
DR SMART; SM00739; KOW; 1.
DR SMART; SM00363; S4; 1.
DR PROSITE; PS00528; RIBOSOMAL_S4E; 1.
DR PROSITE; PS50889; S4; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Reference proteome; Ribonucleoprotein; Ribosomal protein;
KW RNA-binding; rRNA-binding.
FT CHAIN 1..243
FT /note="30S ribosomal protein S4e"
FT /id="PRO_0000130859"
FT DOMAIN 43..105
FT /note="S4 RNA-binding"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00485"
SQ SEQUENCE 243 AA; 28146 MW; 0A0BF515902E1CE7 CRC64;
MARKGPKRHL KRLAAPTSWY IERKAYKWAV RPRPGPHNMR TSIPLLYIVR DYLGYAKTAR
EARKILNEGK FLVDGRVRKD YKFPVGIMDV VSIPETGEHY RVLPNRIGKL ILHPISEDEA
FIKPLRIRNK RMIKGARVQL NFHDGTNHIV SIAEKDNYFT SYTVLMKVPE REILEVLPFE
KGAYVFVTQG KNVARKGRIV EIKRFPMGWP DVVTIEDEEG ELFDTLKEYA FVVGTDKPKI
SLP