RS4E_THEKO
ID RS4E_THEKO Reviewed; 243 AA.
AC Q5JJG0;
DT 30-AUG-2005, integrated into UniProtKB/Swiss-Prot.
DT 15-FEB-2005, sequence version 1.
DT 25-MAY-2022, entry version 94.
DE RecName: Full=30S ribosomal protein S4e {ECO:0000255|HAMAP-Rule:MF_00485};
GN Name=rps4e {ECO:0000255|HAMAP-Rule:MF_00485}; OrderedLocusNames=TK1529;
OS Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
OS (Pyrococcus kodakaraensis (strain KOD1)).
OC Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae;
OC Thermococcus.
OX NCBI_TaxID=69014;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-918 / JCM 12380 / KOD1;
RX PubMed=15710748; DOI=10.1101/gr.3003105;
RA Fukui T., Atomi H., Kanai T., Matsumi R., Fujiwara S., Imanaka T.;
RT "Complete genome sequence of the hyperthermophilic archaeon Thermococcus
RT kodakaraensis KOD1 and comparison with Pyrococcus genomes.";
RL Genome Res. 15:352-363(2005).
CC -!- SIMILARITY: Belongs to the eukaryotic ribosomal protein eS4 family.
CC {ECO:0000255|HAMAP-Rule:MF_00485}.
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DR EMBL; AP006878; BAD85718.1; -; Genomic_DNA.
DR RefSeq; WP_011250480.1; NC_006624.1.
DR PDB; 6SKF; EM; 2.95 A; Af=1-243.
DR PDB; 6SKG; EM; 2.65 A; Af=1-243.
DR PDB; 6TH6; EM; 2.55 A; Af=1-243.
DR PDBsum; 6SKF; -.
DR PDBsum; 6SKG; -.
DR PDBsum; 6TH6; -.
DR AlphaFoldDB; Q5JJG0; -.
DR SMR; Q5JJG0; -.
DR IntAct; Q5JJG0; 1.
DR MINT; Q5JJG0; -.
DR STRING; 69014.TK1529; -.
DR EnsemblBacteria; BAD85718; BAD85718; TK1529.
DR GeneID; 3233882; -.
DR KEGG; tko:TK1529; -.
DR PATRIC; fig|69014.16.peg.1489; -.
DR eggNOG; arCOG04093; Archaea.
DR HOGENOM; CLU_060400_0_0_2; -.
DR InParanoid; Q5JJG0; -.
DR OMA; FPVGLMD; -.
DR OrthoDB; 89943at2157; -.
DR PhylomeDB; Q5JJG0; -.
DR Proteomes; UP000000536; Chromosome.
DR GO; GO:0022627; C:cytosolic small ribosomal subunit; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0006412; P:translation; IBA:GO_Central.
DR CDD; cd06087; KOW_RPS4; 1.
DR CDD; cd00165; S4; 1.
DR Gene3D; 2.30.30.30; -; 1.
DR Gene3D; 2.40.50.740; -; 1.
DR Gene3D; 3.10.290.10; -; 1.
DR HAMAP; MF_00485; Ribosomal_S4e; 1.
DR InterPro; IPR041982; KOW_RPS4.
DR InterPro; IPR014722; Rib_L2_dom2.
DR InterPro; IPR000876; Ribosomal_S4e.
DR InterPro; IPR013845; Ribosomal_S4e_central_region.
DR InterPro; IPR038237; Ribosomal_S4e_central_sf.
DR InterPro; IPR013843; Ribosomal_S4e_N.
DR InterPro; IPR018199; Ribosomal_S4e_N_CS.
DR InterPro; IPR002942; S4_RNA-bd.
DR InterPro; IPR036986; S4_RNA-bd_sf.
DR PANTHER; PTHR11581; PTHR11581; 1.
DR Pfam; PF00900; Ribosomal_S4e; 1.
DR Pfam; PF08071; RS4NT; 1.
DR Pfam; PF01479; S4; 1.
DR PIRSF; PIRSF002116; Ribosomal_S4; 1.
DR SMART; SM00363; S4; 1.
DR PROSITE; PS00528; RIBOSOMAL_S4E; 1.
DR PROSITE; PS50889; S4; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Reference proteome; Ribonucleoprotein; Ribosomal protein;
KW RNA-binding; rRNA-binding.
FT CHAIN 1..243
FT /note="30S ribosomal protein S4e"
FT /id="PRO_0000130861"
FT DOMAIN 43..105
FT /note="S4 RNA-binding"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00485"
SQ SEQUENCE 243 AA; 27771 MW; 3C3EA422D30F7D69 CRC64;
MARKGPKRHL KRLAAPTSWY IHRKAYKWAV RPSPGPHSMK TSIPLIYIVR DYLGYAKTAR
EARKILNEGK ILVDGRVRKD YKFPVGIMDV VSIPETGEHY RVLPNRIGKL ILHPISEEEA
KLKPFRINNK RMVKGAKVQL NLHDGSNHLV SLAEKDAYKT SYTVIMQVPE RQIVKVLPFE
VGAYVFVTQG KNVARKGKIV EVRQFPMGWP DVVTIEDENG ELFDTLKEYA FVIGKDKPEI
SLP
