RS4Y1_PANTR
ID RS4Y1_PANTR Reviewed; 263 AA.
AC Q861U9;
DT 21-NOV-2003, integrated into UniProtKB/Swiss-Prot.
DT 23-JAN-2007, sequence version 2.
DT 03-AUG-2022, entry version 112.
DE RecName: Full=40S ribosomal protein S4, Y isoform 1;
GN Name=RPS4Y1; Synonyms=RPS4Y;
OS Pan troglodytes (Chimpanzee).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Pan.
OX NCBI_TaxID=9598;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=12572605; DOI=10.1093/oxfordjournals.molbev.a025869;
RA Bergen A.W., Pratt M., Mehlman P., Goldman D.;
RT "Evolution of RPS4Y.";
RL Mol. Biol. Evol. 15:1412-1419(1998).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Hughes J.F., Pyntikova T., Skaletsky H., Minx P.J., Rozen S., Wilson R.K.,
RA Page D.C.;
RT "The DNA sequence of the chimpanzee Y chromosome.";
RL Submitted (JUL-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the eukaryotic ribosomal protein eS4 family.
CC {ECO:0000305}.
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DR EMBL; AH012491; AAO37287.1; -; Genomic_DNA.
DR EMBL; AY633110; AAT46347.1; -; mRNA.
DR RefSeq; NP_001008987.1; NM_001008987.1.
DR AlphaFoldDB; Q861U9; -.
DR SMR; Q861U9; -.
DR STRING; 9598.ENSPTRP00000038748; -.
DR PaxDb; Q861U9; -.
DR Ensembl; ENSPTRT00000041959; ENSPTRP00000038748; ENSPTRG00000022470.
DR GeneID; 449509; -.
DR KEGG; ptr:449509; -.
DR CTD; 6192; -.
DR VGNC; VGNC:5895; RPS4Y1.
DR eggNOG; KOG0378; Eukaryota.
DR GeneTree; ENSGT00390000005569; -.
DR HOGENOM; CLU_060400_1_0_1; -.
DR InParanoid; Q861U9; -.
DR OMA; WMLDELT; -.
DR OrthoDB; 1065966at2759; -.
DR TreeFam; TF300612; -.
DR Proteomes; UP000002277; Chromosome Y.
DR Bgee; ENSPTRG00000022470; Expressed in testis and 11 other tissues.
DR GO; GO:0022627; C:cytosolic small ribosomal subunit; IBA:GO_Central.
DR GO; GO:0005844; C:polysome; IEA:Ensembl.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0006412; P:translation; IBA:GO_Central.
DR CDD; cd06087; KOW_RPS4; 1.
DR CDD; cd00165; S4; 1.
DR Gene3D; 2.30.30.30; -; 1.
DR Gene3D; 2.40.50.740; -; 1.
DR Gene3D; 3.10.290.10; -; 1.
DR HAMAP; MF_00485; Ribosomal_S4e; 1.
DR InterPro; IPR032277; 40S_S4_C.
DR InterPro; IPR005824; KOW.
DR InterPro; IPR041982; KOW_RPS4.
DR InterPro; IPR014722; Rib_L2_dom2.
DR InterPro; IPR000876; Ribosomal_S4e.
DR InterPro; IPR013845; Ribosomal_S4e_central_region.
DR InterPro; IPR038237; Ribosomal_S4e_central_sf.
DR InterPro; IPR013843; Ribosomal_S4e_N.
DR InterPro; IPR018199; Ribosomal_S4e_N_CS.
DR InterPro; IPR002942; S4_RNA-bd.
DR InterPro; IPR036986; S4_RNA-bd_sf.
DR PANTHER; PTHR11581; PTHR11581; 1.
DR Pfam; PF16121; 40S_S4_C; 1.
DR Pfam; PF00467; KOW; 1.
DR Pfam; PF00900; Ribosomal_S4e; 1.
DR Pfam; PF08071; RS4NT; 1.
DR PIRSF; PIRSF002116; Ribosomal_S4; 1.
DR SMART; SM00363; S4; 1.
DR PROSITE; PS00528; RIBOSOMAL_S4E; 1.
DR PROSITE; PS50889; S4; 1.
PE 2: Evidence at transcript level;
KW Reference proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding;
KW rRNA-binding.
FT CHAIN 1..263
FT /note="40S ribosomal protein S4, Y isoform 1"
FT /id="PRO_0000130816"
FT DOMAIN 42..104
FT /note="S4 RNA-binding"
SQ SEQUENCE 263 AA; 29398 MW; 3B5D6F1ECFCE060A CRC64;
MARGPKKHLK RVAAPKHWML DKLTGVFAPR PSTGPHKLRE CLPLIVFLRN RLKYALTGDE
VKKICMQRFI KIDGKVRVDV TYPAGFMDVI SIEKTGEHFR LVYDTKGRFA VHRITVEEAK
YKLCKVRKIT VGVKGIPHLV THDARTIRYP DPVIKVNDTV QIDLGTGKII NFIKFDTGNL
CMVIGGANLG RVGVITNRER HPGSFDVVHV KDANGNSFAT RLSNIFVIGN GNKPWISLPR
GKGIRLTVAA ERDKRLATKQ SSG
