RS4_ENTFA
ID RS4_ENTFA Reviewed; 203 AA.
AC Q82ZI6;
DT 16-JAN-2004, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2003, sequence version 1.
DT 03-AUG-2022, entry version 100.
DE RecName: Full=30S ribosomal protein S4 {ECO:0000255|HAMAP-Rule:MF_01306};
GN Name=rpsD {ECO:0000255|HAMAP-Rule:MF_01306}; OrderedLocusNames=EF_3070;
OS Enterococcus faecalis (strain ATCC 700802 / V583).
OC Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae;
OC Enterococcus.
OX NCBI_TaxID=226185;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700802 / V583;
RX PubMed=12663927; DOI=10.1126/science.1080613;
RA Paulsen I.T., Banerjei L., Myers G.S.A., Nelson K.E., Seshadri R.,
RA Read T.D., Fouts D.E., Eisen J.A., Gill S.R., Heidelberg J.F., Tettelin H.,
RA Dodson R.J., Umayam L.A., Brinkac L.M., Beanan M.J., Daugherty S.C.,
RA DeBoy R.T., Durkin S.A., Kolonay J.F., Madupu R., Nelson W.C.,
RA Vamathevan J.J., Tran B., Upton J., Hansen T., Shetty J., Khouri H.M.,
RA Utterback T.R., Radune D., Ketchum K.A., Dougherty B.A., Fraser C.M.;
RT "Role of mobile DNA in the evolution of vancomycin-resistant Enterococcus
RT faecalis.";
RL Science 299:2071-2074(2003).
CC -!- FUNCTION: One of the primary rRNA binding proteins, it binds directly
CC to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
CC {ECO:0000255|HAMAP-Rule:MF_01306}.
CC -!- FUNCTION: With S5 and S12 plays an important role in translational
CC accuracy. {ECO:0000255|HAMAP-Rule:MF_01306}.
CC -!- SUBUNIT: Part of the 30S ribosomal subunit. Contacts protein S5. The
CC interaction surface between S4 and S5 is involved in control of
CC translational fidelity. {ECO:0000255|HAMAP-Rule:MF_01306}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uS4 family.
CC {ECO:0000255|HAMAP-Rule:MF_01306}.
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DR EMBL; AE016830; AAO82752.1; -; Genomic_DNA.
DR RefSeq; NP_816682.1; NC_004668.1.
DR RefSeq; WP_002365342.1; NZ_KE136524.1.
DR PDB; 6WUB; EM; 3.20 A; d=2-202.
DR PDB; 7P7R; EM; 2.90 A; e=1-203.
DR PDBsum; 6WUB; -.
DR PDBsum; 7P7R; -.
DR AlphaFoldDB; Q82ZI6; -.
DR SMR; Q82ZI6; -.
DR STRING; 226185.EF_3070; -.
DR EnsemblBacteria; AAO82752; AAO82752; EF_3070.
DR GeneID; 60894959; -.
DR KEGG; efa:EF3070; -.
DR PATRIC; fig|226185.45.peg.501; -.
DR eggNOG; COG0522; Bacteria.
DR HOGENOM; CLU_092403_0_1_9; -.
DR OMA; NVVFRMG; -.
DR Proteomes; UP000001415; Chromosome.
DR GO; GO:0015935; C:small ribosomal subunit; IEA:InterPro.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR CDD; cd00165; S4; 1.
DR Gene3D; 3.10.290.10; -; 1.
DR HAMAP; MF_01306_B; Ribosomal_S4_B; 1.
DR InterPro; IPR022801; Ribosomal_S4/S9.
DR InterPro; IPR001912; Ribosomal_S4/S9_N.
DR InterPro; IPR005709; Ribosomal_S4_bac-type.
DR InterPro; IPR018079; Ribosomal_S4_CS.
DR InterPro; IPR002942; S4_RNA-bd.
DR InterPro; IPR036986; S4_RNA-bd_sf.
DR PANTHER; PTHR11831; PTHR11831; 1.
DR PANTHER; PTHR11831:SF4; PTHR11831:SF4; 1.
DR Pfam; PF00163; Ribosomal_S4; 1.
DR Pfam; PF01479; S4; 1.
DR SMART; SM01390; Ribosomal_S4; 1.
DR SMART; SM00363; S4; 1.
DR TIGRFAMs; TIGR01017; rpsD_bact; 1.
DR PROSITE; PS00632; RIBOSOMAL_S4; 1.
DR PROSITE; PS50889; S4; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Reference proteome; Ribonucleoprotein; Ribosomal protein;
KW RNA-binding; rRNA-binding.
FT CHAIN 1..203
FT /note="30S ribosomal protein S4"
FT /id="PRO_0000132383"
FT DOMAIN 93..156
FT /note="S4 RNA-binding"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01306"
FT REGION 22..45
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT HELIX 10..15
FT /evidence="ECO:0007829|PDB:6WUB"
FT STRAND 25..28
FT /evidence="ECO:0007829|PDB:6WUB"
FT STRAND 37..39
FT /evidence="ECO:0007829|PDB:6WUB"
FT HELIX 46..60
FT /evidence="ECO:0007829|PDB:6WUB"
FT HELIX 65..75
FT /evidence="ECO:0007829|PDB:6WUB"
FT HELIX 84..90
FT /evidence="ECO:0007829|PDB:6WUB"
FT HELIX 91..93
FT /evidence="ECO:0007829|PDB:6WUB"
FT HELIX 95..102
FT /evidence="ECO:0007829|PDB:6WUB"
FT HELIX 108..116
FT /evidence="ECO:0007829|PDB:6WUB"
FT HELIX 150..157
FT /evidence="ECO:0007829|PDB:6WUB"
FT STRAND 164..169
FT /evidence="ECO:0007829|PDB:6WUB"
FT TURN 170..173
FT /evidence="ECO:0007829|PDB:6WUB"
FT STRAND 174..179
FT /evidence="ECO:0007829|PDB:6WUB"
FT HELIX 183..185
FT /evidence="ECO:0007829|PDB:6WUB"
FT HELIX 194..198
FT /evidence="ECO:0007829|PDB:6WUB"
SQ SEQUENCE 203 AA; 23234 MW; E372215A9EE50093 CRC64;
MSRYTGPSWK VSRRLGISLS GTGKELARRP YKPGQHGPNS RGKVSEYGMQ LTEKQKLRHM
YGMNERQFRT LFIKASKIKE GKHGVNFMVL LEQRLDNVVY RLGLATTRRQ ARQLVNHGHI
TVDGKRVDIP SYHVEVGQVI GVREKSQNIS TIKEAVEATV GRPAFVSFDT EKLEGSFTRL
PERDELYPEI DEALVVEYYN QKL