BAMD_RHILO
ID BAMD_RHILO Reviewed; 289 AA.
AC Q98KC1;
DT 26-SEP-2001, integrated into UniProtKB/Swiss-Prot.
DT 26-SEP-2001, sequence version 1.
DT 25-MAY-2022, entry version 117.
DE RecName: Full=Outer membrane protein assembly factor BamD {ECO:0000255|HAMAP-Rule:MF_00922};
DE Flags: Precursor;
GN Name=bamD {ECO:0000255|HAMAP-Rule:MF_00922}; OrderedLocusNames=mll1543;
OS Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099)
OS (Mesorhizobium loti (strain MAFF 303099)).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
OC Phyllobacteriaceae; Mesorhizobium.
OX NCBI_TaxID=266835;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=LMG 29417 / CECT 9101 / MAFF 303099;
RX PubMed=11214968; DOI=10.1093/dnares/7.6.331;
RA Kaneko T., Nakamura Y., Sato S., Asamizu E., Kato T., Sasamoto S.,
RA Watanabe A., Idesawa K., Ishikawa A., Kawashima K., Kimura T., Kishida Y.,
RA Kiyokawa C., Kohara M., Matsumoto M., Matsuno A., Mochizuki Y.,
RA Nakayama S., Nakazaki N., Shimpo S., Sugimoto M., Takeuchi C., Yamada M.,
RA Tabata S.;
RT "Complete genome structure of the nitrogen-fixing symbiotic bacterium
RT Mesorhizobium loti.";
RL DNA Res. 7:331-338(2000).
CC -!- FUNCTION: Part of the outer membrane protein assembly complex, which is
CC involved in assembly and insertion of beta-barrel proteins into the
CC outer membrane. {ECO:0000255|HAMAP-Rule:MF_00922}.
CC -!- SUBUNIT: Part of the Bam complex. {ECO:0000255|HAMAP-Rule:MF_00922}.
CC -!- SUBCELLULAR LOCATION: Cell outer membrane {ECO:0000255|HAMAP-
CC Rule:MF_00922}; Lipid-anchor {ECO:0000255|HAMAP-Rule:MF_00922}.
CC -!- SIMILARITY: Belongs to the BamD family. {ECO:0000255|HAMAP-
CC Rule:MF_00922}.
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DR EMBL; BA000012; BAB48893.1; -; Genomic_DNA.
DR RefSeq; WP_010910246.1; NC_002678.2.
DR AlphaFoldDB; Q98KC1; -.
DR SMR; Q98KC1; -.
DR STRING; 266835.14022283; -.
DR EnsemblBacteria; BAB48893; BAB48893; BAB48893.
DR GeneID; 66683347; -.
DR KEGG; mlo:mll1543; -.
DR eggNOG; COG4105; Bacteria.
DR HOGENOM; CLU_065982_1_1_5; -.
DR OMA; VERQHPY; -.
DR OrthoDB; 1256747at2; -.
DR Proteomes; UP000000552; Chromosome.
DR GO; GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0043165; P:Gram-negative-bacterium-type cell outer membrane assembly; IEA:UniProtKB-UniRule.
DR GO; GO:0051205; P:protein insertion into membrane; IEA:UniProtKB-UniRule.
DR CDD; cd15830; BamD; 1.
DR Gene3D; 1.25.40.10; -; 1.
DR HAMAP; MF_00922; OM_assembly_BamD; 1.
DR InterPro; IPR017689; BamD.
DR InterPro; IPR039565; BamD-like.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF13525; YfiO; 1.
DR SUPFAM; SSF48452; SSF48452; 1.
DR TIGRFAMs; TIGR03302; OM_YfiO; 1.
DR PROSITE; PS51257; PROKAR_LIPOPROTEIN; 1.
DR PROSITE; PS50293; TPR_REGION; 1.
PE 3: Inferred from homology;
KW Cell outer membrane; Lipoprotein; Membrane; Palmitate; Repeat; Signal;
KW TPR repeat.
FT SIGNAL 1..31
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00922"
FT CHAIN 32..289
FT /note="Outer membrane protein assembly factor BamD"
FT /id="PRO_0000036231"
FT REPEAT 51..84
FT /note="TPR 1"
FT REPEAT 87..121
FT /note="TPR 2"
FT REPEAT 184..217
FT /note="TPR 3"
FT LIPID 32
FT /note="N-palmitoyl cysteine"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00922"
FT LIPID 32
FT /note="S-diacylglycerol cysteine"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00922"
SQ SEQUENCE 289 AA; 32761 MW; D227DB4AB2BB9278 CRC64;
MFFKRVGQSK APQRSVLLAL SLVVPSLFLS ACMSSEKDID LSKYVDQTEP ADVLYNQGLA
NLNAGRLDEA SKKFDAVDRQ HPYSEWARKS MVMGAFADYR KGSYDEAISS AKRYLALYPS
TDDAPYAQYI IGLSYYRQIK DVTQDQKEAR QTLQTMQDLV TRWPTSEYVD DAKEKIRFAN
DQLAGKEMQI GRYYLERREY IAAVKRFRTV VENYSNTRHV EEALARLTES YYAMGLTSEA
QTAAAVLGTN YPDSPWYKDS YKLLQSNGLS PRENAGSWIS KAGKLITGA
