BAMD_VIBCH
ID BAMD_VIBCH Reviewed; 241 AA.
AC Q9KU21;
DT 26-SEP-2001, integrated into UniProtKB/Swiss-Prot.
DT 26-SEP-2001, sequence version 2.
DT 25-MAY-2022, entry version 114.
DE RecName: Full=Outer membrane protein assembly factor BamD {ECO:0000255|HAMAP-Rule:MF_00922};
DE Flags: Precursor;
GN Name=bamD {ECO:0000255|HAMAP-Rule:MF_00922}; OrderedLocusNames=VC_0708;
OS Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Vibrio.
OX NCBI_TaxID=243277;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 39315 / El Tor Inaba N16961;
RX PubMed=10952301; DOI=10.1038/35020000;
RA Heidelberg J.F., Eisen J.A., Nelson W.C., Clayton R.A., Gwinn M.L.,
RA Dodson R.J., Haft D.H., Hickey E.K., Peterson J.D., Umayam L.A., Gill S.R.,
RA Nelson K.E., Read T.D., Tettelin H., Richardson D.L., Ermolaeva M.D.,
RA Vamathevan J.J., Bass S., Qin H., Dragoi I., Sellers P., McDonald L.A.,
RA Utterback T.R., Fleischmann R.D., Nierman W.C., White O., Salzberg S.L.,
RA Smith H.O., Colwell R.R., Mekalanos J.J., Venter J.C., Fraser C.M.;
RT "DNA sequence of both chromosomes of the cholera pathogen Vibrio
RT cholerae.";
RL Nature 406:477-483(2000).
CC -!- FUNCTION: Part of the outer membrane protein assembly complex, which is
CC involved in assembly and insertion of beta-barrel proteins into the
CC outer membrane. {ECO:0000255|HAMAP-Rule:MF_00922}.
CC -!- SUBUNIT: Part of the Bam complex. {ECO:0000255|HAMAP-Rule:MF_00922}.
CC -!- SUBCELLULAR LOCATION: Cell outer membrane {ECO:0000255|HAMAP-
CC Rule:MF_00922}; Lipid-anchor {ECO:0000255|HAMAP-Rule:MF_00922}.
CC -!- SIMILARITY: Belongs to the BamD family. {ECO:0000255|HAMAP-
CC Rule:MF_00922}.
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DR EMBL; AE003852; AAF93873.1; -; Genomic_DNA.
DR PIR; F82289; F82289.
DR RefSeq; NP_230357.1; NC_002505.1.
DR RefSeq; WP_000877198.1; NZ_LT906614.1.
DR AlphaFoldDB; Q9KU21; -.
DR SMR; Q9KU21; -.
DR STRING; 243277.VC_0708; -.
DR DNASU; 2615712; -.
DR EnsemblBacteria; AAF93873; AAF93873; VC_0708.
DR GeneID; 57739420; -.
DR KEGG; vch:VC_0708; -.
DR PATRIC; fig|243277.26.peg.678; -.
DR eggNOG; COG4105; Bacteria.
DR HOGENOM; CLU_065982_0_2_6; -.
DR OMA; VERQHPY; -.
DR Proteomes; UP000000584; Chromosome 1.
DR GO; GO:1990063; C:Bam protein complex; IBA:GO_Central.
DR GO; GO:0043165; P:Gram-negative-bacterium-type cell outer membrane assembly; IEA:UniProtKB-UniRule.
DR GO; GO:0051205; P:protein insertion into membrane; IBA:GO_Central.
DR CDD; cd15830; BamD; 1.
DR Gene3D; 1.25.40.10; -; 1.
DR HAMAP; MF_00922; OM_assembly_BamD; 1.
DR InterPro; IPR017689; BamD.
DR InterPro; IPR039565; BamD-like.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR Pfam; PF13525; YfiO; 1.
DR SUPFAM; SSF48452; SSF48452; 1.
DR TIGRFAMs; TIGR03302; OM_YfiO; 1.
DR PROSITE; PS51257; PROKAR_LIPOPROTEIN; 1.
PE 3: Inferred from homology;
KW Cell outer membrane; Lipoprotein; Membrane; Palmitate; Reference proteome;
KW Signal.
FT SIGNAL 1..17
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00922"
FT CHAIN 18..241
FT /note="Outer membrane protein assembly factor BamD"
FT /id="PRO_0000036233"
FT LIPID 18
FT /note="N-palmitoyl cysteine"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00922"
FT LIPID 18
FT /note="S-diacylglycerol cysteine"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00922"
SQ SEQUENCE 241 AA; 27876 MW; BF1991E7FB144124 CRC64;
MKYQTLSGLL ALSLLFGCSS SPDVVPDVPP SQLYSEAQTA LQSGTWLTAI EKLEALDSRY
PFGAYSEQVQ LDLIYAYYKN DDLALGLATI ERFTRLNPTH EKMDWVLYMR GLTHMAQDRN
FMHDLFNIDR RDRDPEPVKA AFADFKKLLQ RYPNSPYAED AQRRMFALKN RLAEYDLATA
DFYLRREAWI AAINRTQELQ KTYPDTEAAR KSLEIQLEAY QQLGLTDAIE RTKQLMQLNP
L
