RS5_RHOPA
ID RS5_RHOPA Reviewed; 191 AA.
AC Q6N4V0;
DT 30-AUG-2005, integrated into UniProtKB/Swiss-Prot.
DT 23-JAN-2007, sequence version 3.
DT 03-AUG-2022, entry version 98.
DE RecName: Full=30S ribosomal protein S5 {ECO:0000255|HAMAP-Rule:MF_01307};
DE AltName: Full=RRP-S5;
GN Name=rpsE {ECO:0000255|HAMAP-Rule:MF_01307}; OrderedLocusNames=RPA3233;
OS Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
OC Bradyrhizobiaceae; Rhodopseudomonas.
OX NCBI_TaxID=258594;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-98 / CGA009;
RX PubMed=14704707; DOI=10.1038/nbt923;
RA Larimer F.W., Chain P., Hauser L., Lamerdin J.E., Malfatti S., Do L.,
RA Land M.L., Pelletier D.A., Beatty J.T., Lang A.S., Tabita F.R.,
RA Gibson J.L., Hanson T.E., Bobst C., Torres y Torres J.L., Peres C.,
RA Harrison F.H., Gibson J., Harwood C.S.;
RT "Complete genome sequence of the metabolically versatile photosynthetic
RT bacterium Rhodopseudomonas palustris.";
RL Nat. Biotechnol. 22:55-61(2004).
RN [2]
RP MASS SPECTROMETRY.
RC STRAIN=ATCC BAA-98 / CGA009;
RX PubMed=15473684; DOI=10.1021/pr049940z;
RA Strader M.B., VerBerkmoes N.C., Tabb D.L., Connelly H.M., Barton J.W.,
RA Bruce B.D., Pelletier D.A., Davison B.H., Hettich R.L., Larimer F.W.,
RA Hurst G.B.;
RT "Characterization of the 70S ribosome from Rhodopseudomonas palustris using
RT an integrated 'top-down' and 'bottom-up' mass spectrometric approach.";
RL J. Proteome Res. 3:965-978(2004).
CC -!- FUNCTION: With S4 and S12 plays an important role in translational
CC accuracy. {ECO:0000255|HAMAP-Rule:MF_01307}.
CC -!- FUNCTION: Located at the back of the 30S subunit body where it
CC stabilizes the conformation of the head with respect to the body.
CC {ECO:0000255|HAMAP-Rule:MF_01307}.
CC -!- SUBUNIT: Part of the 30S ribosomal subunit. Contacts proteins S4 and
CC S8. {ECO:0000255|HAMAP-Rule:MF_01307}.
CC -!- DOMAIN: The N-terminal domain interacts with the head of the 30S
CC subunit; the C-terminal domain interacts with the body and contacts
CC protein S4. The interaction surface between S4 and S5 is involved in
CC control of translational fidelity.
CC -!- MASS SPECTROMETRY: Mass=20522.4; Method=Electrospray;
CC Evidence={ECO:0000269|PubMed:15473684};
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uS5 family.
CC {ECO:0000255|HAMAP-Rule:MF_01307}.
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DR EMBL; BX572603; CAE28674.1; -; Genomic_DNA.
DR RefSeq; WP_011158778.1; NC_005296.1.
DR AlphaFoldDB; Q6N4V0; -.
DR SMR; Q6N4V0; -.
DR IntAct; Q6N4V0; 1.
DR STRING; 258594.RPA3233; -.
DR PRIDE; Q6N4V0; -.
DR EnsemblBacteria; CAE28674; CAE28674; RPA3233.
DR GeneID; 66894319; -.
DR KEGG; rpa:RPA3233; -.
DR eggNOG; COG0098; Bacteria.
DR HOGENOM; CLU_065898_2_2_5; -.
DR OMA; KRGCGSW; -.
DR PhylomeDB; Q6N4V0; -.
DR BioCyc; RPAL258594:TX73_RS16495-MON; -.
DR Proteomes; UP000001426; Chromosome.
DR GO; GO:0015935; C:small ribosomal subunit; IEA:InterPro.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR Gene3D; 3.30.230.10; -; 1.
DR HAMAP; MF_01307_B; Ribosomal_S5_B; 1.
DR InterPro; IPR000851; Ribosomal_S5.
DR InterPro; IPR005712; Ribosomal_S5_bac-type.
DR InterPro; IPR005324; Ribosomal_S5_C.
DR InterPro; IPR020568; Ribosomal_S5_D2-typ_fold.
DR InterPro; IPR014721; Ribosomal_S5_D2-typ_fold_subgr.
DR InterPro; IPR013810; Ribosomal_S5_N.
DR InterPro; IPR018192; Ribosomal_S5_N_CS.
DR PANTHER; PTHR13718; PTHR13718; 1.
DR Pfam; PF00333; Ribosomal_S5; 1.
DR Pfam; PF03719; Ribosomal_S5_C; 1.
DR SUPFAM; SSF54211; SSF54211; 1.
DR TIGRFAMs; TIGR01021; rpsE_bact; 1.
DR PROSITE; PS00585; RIBOSOMAL_S5; 1.
DR PROSITE; PS50881; S5_DSRBD; 1.
PE 1: Evidence at protein level;
KW Reference proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding;
KW rRNA-binding.
FT INIT_MET 1
FT /note="Removed"
FT CHAIN 2..191
FT /note="30S ribosomal protein S5"
FT /id="PRO_0000131581"
FT DOMAIN 23..86
FT /note="S5 DRBM"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01307"
FT REGION 1..21
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 191 AA; 20655 MW; 2ED15D345B2202B2 CRC64;
MAAERERGGR ERSREREERD SEFVDKLVHI NRVAKVVKGG KRFGFAALVV VGDQKGRVGF
GHGKAREVPE AIRKATESAK RNLTRVALRE GRTLHHDIAG RHGAGRVYLR AAPAGTGIIA
GGPMRAVFET LGIADVVAKS VGSSNPYNMV RATFDALKHL DSPRSVAARR NIKVSTLQAR
RVGGDAEVVA E