RS6_MYCS2
ID RS6_MYCS2 Reviewed; 90 AA.
AC A0R7F9; I7GGR9;
DT 10-AUG-2010, integrated into UniProtKB/Swiss-Prot.
DT 09-JAN-2007, sequence version 1.
DT 25-MAY-2022, entry version 90.
DE RecName: Full=30S ribosomal protein S6;
GN Name=rpsF; OrderedLocusNames=MSMEG_6897, MSMEI_6713;
OS Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) (Mycobacterium
OS smegmatis).
OC Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
OC Mycolicibacterium.
OX NCBI_TaxID=246196;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700084 / mc(2)155;
RA Fleischmann R.D., Dodson R.J., Haft D.H., Merkel J.S., Nelson W.C.,
RA Fraser C.M.;
RL Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700084 / mc(2)155;
RX PubMed=17295914; DOI=10.1186/gb-2007-8-2-r20;
RA Deshayes C., Perrodou E., Gallien S., Euphrasie D., Schaeffer C.,
RA Van-Dorsselaer A., Poch O., Lecompte O., Reyrat J.-M.;
RT "Interrupted coding sequences in Mycobacterium smegmatis: authentic
RT mutations or sequencing errors?";
RL Genome Biol. 8:R20.1-R20.9(2007).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700084 / mc(2)155;
RX PubMed=18955433; DOI=10.1101/gr.081901.108;
RA Gallien S., Perrodou E., Carapito C., Deshayes C., Reyrat J.-M.,
RA Van Dorsselaer A., Poch O., Schaeffer C., Lecompte O.;
RT "Ortho-proteogenomics: multiple proteomes investigation through orthology
RT and a new MS-based protocol.";
RL Genome Res. 19:128-135(2009).
RN [4]
RP PUPYLATION AT LYS-33, AND IDENTIFICATION BY MASS SPECTROMETRY.
RX PubMed=20094657; DOI=10.1039/b916104j;
RA Watrous J., Burns K., Liu W.T., Patel A., Hook V., Bafna V.,
RA Barry C.E. III, Bark S., Dorrestein P.C.;
RT "Expansion of the mycobacterial 'PUPylome'.";
RL Mol. Biosyst. 6:376-385(2010).
CC -!- FUNCTION: Binds together with S18 to 16S ribosomal RNA. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the bacterial ribosomal protein bS6 family.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AFP43139.1; Type=Erroneous initiation; Note=Extended N-terminus.; Evidence={ECO:0000305};
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DR EMBL; CP000480; ABK72345.1; -; Genomic_DNA.
DR EMBL; CP001663; AFP43139.1; ALT_INIT; Genomic_DNA.
DR RefSeq; YP_891097.1; NC_008596.1.
DR PDB; 5XYU; EM; 3.45 A; F=1-90.
DR PDBsum; 5XYU; -.
DR AlphaFoldDB; A0R7F9; -.
DR SMR; A0R7F9; -.
DR IntAct; A0R7F9; 1.
DR STRING; 246196.MSMEI_6713; -.
DR PRIDE; A0R7F9; -.
DR EnsemblBacteria; ABK72345; ABK72345; MSMEG_6897.
DR EnsemblBacteria; AFP43139; AFP43139; MSMEI_6713.
DR KEGG; msg:MSMEI_6713; -.
DR KEGG; msm:MSMEG_6897; -.
DR PATRIC; fig|246196.19.peg.6718; -.
DR eggNOG; COG0360; Bacteria.
DR OMA; ITEASPM; -.
DR Proteomes; UP000000757; Chromosome.
DR Proteomes; UP000006158; Chromosome.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR CDD; cd00473; bS6; 1.
DR Gene3D; 3.30.70.60; -; 1.
DR HAMAP; MF_00360; Ribosomal_S6; 1.
DR InterPro; IPR000529; Ribosomal_S6.
DR InterPro; IPR020815; Ribosomal_S6_CS.
DR InterPro; IPR020814; Ribosomal_S6_plastid/chlpt.
DR InterPro; IPR035980; Ribosomal_S6_sf.
DR InterPro; IPR014717; Transl_elong_EF1B/ribosomal_S6.
DR PANTHER; PTHR21011; PTHR21011; 1.
DR Pfam; PF01250; Ribosomal_S6; 1.
DR SUPFAM; SSF54995; SSF54995; 1.
DR TIGRFAMs; TIGR00166; S6; 1.
DR PROSITE; PS01048; RIBOSOMAL_S6; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Isopeptide bond; Reference proteome; Ribonucleoprotein;
KW Ribosomal protein; RNA-binding; rRNA-binding; Ubl conjugation.
FT CHAIN 1..90
FT /note="30S ribosomal protein S6"
FT /id="PRO_0000396099"
FT CROSSLNK 33
FT /note="Isoglutamyl lysine isopeptide (Lys-Gln) (interchain
FT with Q-Cter in protein Pup)"
FT /evidence="ECO:0000269|PubMed:20094657"
FT STRAND 6..8
FT /evidence="ECO:0007829|PDB:5XYU"
FT STRAND 46..48
FT /evidence="ECO:0007829|PDB:5XYU"
FT HELIX 63..75
FT /evidence="ECO:0007829|PDB:5XYU"
FT STRAND 78..82
FT /evidence="ECO:0007829|PDB:5XYU"
SQ SEQUENCE 90 AA; 10185 MW; 28C958C9E701B3F2 CRC64;
MVILDPTLDE RTVAPSLETF LNVIRKDGGT VDKVDIWGRR RLAYEIAKHA EGIYAVIDVK
AEPATVSELD RQLNLNESVL RTKVLRTDKH
