RS7_PYRAB
ID RS7_PYRAB Reviewed; 215 AA.
AC Q9V109; G8ZJ85;
DT 02-NOV-2001, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 25-MAY-2022, entry version 116.
DE RecName: Full=30S ribosomal protein S7 {ECO:0000255|HAMAP-Rule:MF_00480};
GN Name=rps7 {ECO:0000255|HAMAP-Rule:MF_00480}; OrderedLocusNames=PYRAB06200;
GN ORFNames=PAB0428;
OS Pyrococcus abyssi (strain GE5 / Orsay).
OC Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae;
OC Pyrococcus.
OX NCBI_TaxID=272844;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=GE5 / Orsay;
RX PubMed=12622808; DOI=10.1046/j.1365-2958.2003.03381.x;
RA Cohen G.N., Barbe V., Flament D., Galperin M., Heilig R., Lecompte O.,
RA Poch O., Prieur D., Querellou J., Ripp R., Thierry J.-C., Van der Oost J.,
RA Weissenbach J., Zivanovic Y., Forterre P.;
RT "An integrated analysis of the genome of the hyperthermophilic archaeon
RT Pyrococcus abyssi.";
RL Mol. Microbiol. 47:1495-1512(2003).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=GE5 / Orsay;
RX PubMed=22057919; DOI=10.1007/s00284-011-0035-x;
RA Gao J., Wang J.;
RT "Re-annotation of two hyperthermophilic archaea Pyrococcus abyssi GE5 and
RT Pyrococcus furiosus DSM 3638.";
RL Curr. Microbiol. 64:118-129(2012).
CC -!- FUNCTION: One of the primary rRNA binding proteins, it binds directly
CC to 16S rRNA where it nucleates assembly of the head domain of the 30S
CC subunit. Is located at the subunit interface close to the decoding
CC center. {ECO:0000255|HAMAP-Rule:MF_00480}.
CC -!- SUBUNIT: Part of the 30S ribosomal subunit. {ECO:0000255|HAMAP-
CC Rule:MF_00480}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uS7 family.
CC {ECO:0000255|HAMAP-Rule:MF_00480}.
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DR EMBL; AJ248284; CAB49542.1; -; Genomic_DNA.
DR EMBL; HE613800; CCE70012.1; -; Genomic_DNA.
DR PIR; G75182; G75182.
DR RefSeq; WP_010867744.1; NC_000868.1.
DR PDB; 6SW9; EM; 4.20 A; H=1-215.
DR PDB; 6SWC; EM; 3.30 A; H=1-215.
DR PDB; 6SWE; EM; 3.10 A; H=1-215.
DR PDBsum; 6SW9; -.
DR PDBsum; 6SWC; -.
DR PDBsum; 6SWE; -.
DR AlphaFoldDB; Q9V109; -.
DR SMR; Q9V109; -.
DR STRING; 272844.PAB0428; -.
DR EnsemblBacteria; CAB49542; CAB49542; PAB0428.
DR GeneID; 1495525; -.
DR KEGG; pab:PAB0428; -.
DR PATRIC; fig|272844.11.peg.658; -.
DR eggNOG; arCOG04254; Archaea.
DR HOGENOM; CLU_063975_0_0_2; -.
DR OMA; KMNIVER; -.
DR OrthoDB; 80498at2157; -.
DR PhylomeDB; Q9V109; -.
DR Proteomes; UP000000810; Chromosome.
DR Proteomes; UP000009139; Chromosome.
DR GO; GO:0015935; C:small ribosomal subunit; IEA:InterPro.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR CDD; cd14867; uS7_Eukaryote; 1.
DR Gene3D; 1.10.455.10; -; 1.
DR HAMAP; MF_00480_A; Ribosomal_S7_A; 1.
DR InterPro; IPR000235; Ribosomal_S5/S7.
DR InterPro; IPR005716; Ribosomal_S5/S7_euk/arc.
DR InterPro; IPR026018; Ribosomal_S7_arc.
DR InterPro; IPR023798; Ribosomal_S7_dom.
DR InterPro; IPR036823; Ribosomal_S7_dom_sf.
DR PANTHER; PTHR11205; PTHR11205; 1.
DR Pfam; PF00177; Ribosomal_S7; 1.
DR PIRSF; PIRSF002122; RPS7p_RPS7a_RPS5e_RPS7o; 1.
DR SUPFAM; SSF47973; SSF47973; 1.
DR TIGRFAMs; TIGR01028; uS7_euk_arch; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Ribonucleoprotein; Ribosomal protein; RNA-binding;
KW rRNA-binding.
FT CHAIN 1..215
FT /note="30S ribosomal protein S7"
FT /id="PRO_0000124407"
FT HELIX 5..8
FT /evidence="ECO:0007829|PDB:6SWE"
FT TURN 18..20
FT /evidence="ECO:0007829|PDB:6SWE"
FT TURN 31..33
FT /evidence="ECO:0007829|PDB:6SWC"
FT STRAND 34..38
FT /evidence="ECO:0007829|PDB:6SWE"
FT HELIX 57..59
FT /evidence="ECO:0007829|PDB:6SWE"
FT STRAND 60..62
FT /evidence="ECO:0007829|PDB:6SWE"
FT HELIX 63..69
FT /evidence="ECO:0007829|PDB:6SWE"
FT STRAND 77..79
FT /evidence="ECO:0007829|PDB:6SWE"
FT STRAND 81..84
FT /evidence="ECO:0007829|PDB:6SWE"
FT STRAND 90..92
FT /evidence="ECO:0007829|PDB:6SWE"
FT HELIX 97..114
FT /evidence="ECO:0007829|PDB:6SWE"
FT HELIX 119..129
FT /evidence="ECO:0007829|PDB:6SWE"
FT STRAND 135..137
FT /evidence="ECO:0007829|PDB:6SWE"
FT STRAND 148..152
FT /evidence="ECO:0007829|PDB:6SWE"
FT HELIX 154..169
FT /evidence="ECO:0007829|PDB:6SWE"
FT TURN 170..175
FT /evidence="ECO:0007829|PDB:6SWE"
FT STRAND 176..178
FT /evidence="ECO:0007829|PDB:6SWE"
FT HELIX 180..191
FT /evidence="ECO:0007829|PDB:6SWE"
FT TURN 192..194
FT /evidence="ECO:0007829|PDB:6SWE"
FT HELIX 200..212
FT /evidence="ECO:0007829|PDB:6SWE"
SQ SEQUENCE 215 AA; 24613 MW; 3D892F51418C6D64 CRC64;
MAKPLSERFF IPHEIKVMGR WSTEDVEVRD PSLKPYINLE PRLLPHTHGR HAKKHFGKAN
VHIVERLINK IMRSGGSHYK VAGHFMRREH RSLNSKKVKA YEVVKEAFKI IEKRTGKNPI
QVLVWAIENA APREDTTSVM FGGIRYHVAV DISPMRRLDV ALRNIALGAS AKCYRTKMSF
AEALAEEIIL AANKDPKSYA YSKKLEIERI AESSR
