BASS3_ORYSJ
ID BASS3_ORYSJ Reviewed; 423 AA.
AC Q6K739; A0A0P0VIY3;
DT 05-SEP-2012, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 102.
DE RecName: Full=Probable sodium/metabolite cotransporter BASS3, chloroplastic;
DE AltName: Full=Bile acid-sodium symporter family protein 3;
DE Flags: Precursor;
GN Name=BASS3; OrderedLocusNames=Os02g0475400, LOC_Os02g27490;
GN ORFNames=P0419C03.11;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
CC -!- FUNCTION: May function as sodium-coupled metabolite transporter across
CC the chloroplast envelope. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Multi-pass membrane
CC protein {ECO:0000305}. Plastid, chloroplast envelope {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the bile acid:sodium symporter (BASS) (TC
CC 2.A.28) family. {ECO:0000305}.
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DR EMBL; AP004870; BAD21908.1; -; Genomic_DNA.
DR EMBL; AP008208; BAF08757.1; -; Genomic_DNA.
DR EMBL; AP014958; BAS78651.1; -; Genomic_DNA.
DR EMBL; AK121008; BAH00271.1; -; mRNA.
DR RefSeq; XP_015623178.1; XM_015767692.1.
DR AlphaFoldDB; Q6K739; -.
DR SMR; Q6K739; -.
DR STRING; 4530.OS02T0475400-01; -.
DR PaxDb; Q6K739; -.
DR PRIDE; Q6K739; -.
DR EnsemblPlants; Os02t0475400-01; Os02t0475400-01; Os02g0475400.
DR GeneID; 4329356; -.
DR Gramene; Os02t0475400-01; Os02t0475400-01; Os02g0475400.
DR KEGG; osa:4329356; -.
DR eggNOG; KOG2718; Eukaryota.
DR HOGENOM; CLU_034788_3_0_1; -.
DR InParanoid; Q6K739; -.
DR OMA; LYQSSWI; -.
DR OrthoDB; 1148347at2759; -.
DR Proteomes; UP000000763; Chromosome 2.
DR Proteomes; UP000059680; Chromosome 2.
DR Genevisible; Q6K739; OS.
DR GO; GO:0009941; C:chloroplast envelope; IEA:UniProtKB-SubCell.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR Gene3D; 1.20.1530.20; -; 1.
DR InterPro; IPR002657; BilAc:Na_symport/Acr3.
DR InterPro; IPR004710; Bilac:Na_transpt.
DR InterPro; IPR038770; Na+/solute_symporter_sf.
DR PANTHER; PTHR10361; PTHR10361; 1.
DR Pfam; PF01758; SBF; 1.
PE 2: Evidence at transcript level;
KW Chloroplast; Membrane; Plastid; Reference proteome; Transit peptide;
KW Transmembrane; Transmembrane helix; Transport.
FT TRANSIT 1..45
FT /note="Chloroplast"
FT /evidence="ECO:0000255"
FT CHAIN 46..423
FT /note="Probable sodium/metabolite cotransporter BASS3,
FT chloroplastic"
FT /id="PRO_0000418610"
FT TRANSMEM 106..126
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 138..158
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 165..187
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 192..214
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 231..251
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 254..274
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 287..307
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 318..338
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 380..400
FT /note="Helical"
FT /evidence="ECO:0000255"
SQ SEQUENCE 423 AA; 43787 MW; 389FCCECCEB39E0F CRC64;
MAAAVAASSS SSSSSCAAVG VATASHPHRH RQARFVVSPP APASPAALLW RRPRRVAPTT
FCSAPSLGRV GWPRREGAAW LLSFRAGPVS SPSSAAAGDP SQALSALLPL VVAATAVAAL
GNPATFSWVS KEYYAPALGG IMLSIGIKLS IDDFALAFKR PVPLTIGYMA QYIVKPLMGV
LIARAFGMPS AFFAGFVLTC CVSGAQLSSY ASFLSKGDVA LSILLTSCST ISSVVVTPVL
TGLLIGSVVP VDGIAMAKSI LQVVLVPVTL GLLLNTYAKA VVNVIQPVMP FVAMLCTSLC
IGSPLAINRS KILSSEGFLL LLPIVTFHIA AFIVGYWISK LPMLRQEEPV CRTISVCTGM
QSSTLAGLLA TQFLGSSQAV PAACSVVIMA IFGLTLASYW GNGLRIRDIG SRFVPQASAG
VSS