BASS4_ARATH
ID BASS4_ARATH Reviewed; 436 AA.
AC F4IZC4; Q9LYM5;
DT 05-SEP-2012, integrated into UniProtKB/Swiss-Prot.
DT 28-JUN-2011, sequence version 1.
DT 03-AUG-2022, entry version 60.
DE RecName: Full=Probable sodium/metabolite cotransporter BASS4, chloroplastic;
DE AltName: Full=Bile acid transporter 4;
DE AltName: Full=Bile acid-sodium symporter family protein 4;
DE Flags: Precursor;
GN Name=BASS4; OrderedLocusNames=At3g56160; ORFNames=F18O21.120;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
CC -!- FUNCTION: May function as sodium-coupled metabolite transporter across
CC the chloroplast envelope. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Multi-pass membrane
CC protein {ECO:0000305}. Plastid, chloroplast envelope {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the bile acid:sodium symporter (BASS) (TC
CC 2.A.28) family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=CAB87415.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AL163763; CAB87415.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002686; AEE79488.1; -; Genomic_DNA.
DR PIR; T47733; T47733.
DR RefSeq; NP_191175.2; NM_115474.3.
DR AlphaFoldDB; F4IZC4; -.
DR SMR; F4IZC4; -.
DR BioGRID; 10098; 1.
DR STRING; 3702.AT3G56160.1; -.
DR TCDB; 2.A.28.3.2; the bile acid:na(+) symporter (bass) family.
DR PaxDb; F4IZC4; -.
DR PRIDE; F4IZC4; -.
DR EnsemblPlants; AT3G56160.1; AT3G56160.1; AT3G56160.
DR GeneID; 824782; -.
DR Gramene; AT3G56160.1; AT3G56160.1; AT3G56160.
DR KEGG; ath:AT3G56160; -.
DR Araport; AT3G56160; -.
DR TAIR; locus:2078471; AT3G56160.
DR eggNOG; KOG4821; Eukaryota.
DR HOGENOM; CLU_033952_1_0_1; -.
DR InParanoid; F4IZC4; -.
DR OrthoDB; 949808at2759; -.
DR PRO; PR:F4IZC4; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; F4IZC4; baseline and differential.
DR Genevisible; F4IZC4; AT.
DR GO; GO:0009507; C:chloroplast; HDA:TAIR.
DR GO; GO:0009941; C:chloroplast envelope; HDA:TAIR.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR Gene3D; 1.20.1530.20; -; 1.
DR InterPro; IPR038770; Na+/solute_symporter_sf.
DR InterPro; IPR016833; Put_Na-Bile_cotransptr.
DR PANTHER; PTHR18640; PTHR18640; 1.
DR Pfam; PF13593; SBF_like; 1.
PE 3: Inferred from homology;
KW Chloroplast; Membrane; Plastid; Reference proteome; Transit peptide;
KW Transmembrane; Transmembrane helix; Transport.
FT TRANSIT 1..47
FT /note="Chloroplast"
FT /evidence="ECO:0000255"
FT CHAIN 48..436
FT /note="Probable sodium/metabolite cotransporter BASS4,
FT chloroplastic"
FT /id="PRO_0000418605"
FT TRANSMEM 109..129
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 131..151
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 157..177
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 195..215
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 225..245
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 257..277
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 297..314
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 328..348
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 403..423
FT /note="Helical"
FT /evidence="ECO:0000255"
SQ SEQUENCE 436 AA; 46530 MW; 0A3A9C2C0EBE5CE6 CRC64;
MAIASTLAST QNPFLCLRQP PSPGNRSVVF RRCQDPCGRR WISRSIRACQ PSDKVSGQFP
FDFMYSSMLI PSSCGEWNRI HLGGDGGISA SAQRLYFGKE LLSFASDNFL PLALVSGVGL
GFANPTLGCL ADKYSFTKIS TCGIFIISGL TLRTEAIGAA VKGWPLGLFG LISILLLTPS
FSRLIMLVQL QPRELVTGLG IFCCMPTTLS SGVALTHLAG GNAALALAVT VASNLLGILT
IPFWVSRYIA GGVGVSFPTD QLFRSLIVTL LIPLIIGKVI RESFKGFANF VDNNRKLFSK
INAICLSLVP WIQVSRSRSL LLSVQPKVFL AAVGIGILLH LSLLAFNAVS IRILSGLTGG
SKSSKENSTA VLLVSSQKTL PVMVAVVEQL GGAFGETGLL VLPCVAAHLN QIMIDSVLVN
LWLRRGKDTS TKVKTA
