BASS4_ORYSJ
ID BASS4_ORYSJ Reviewed; 423 AA.
AC Q6ESG1; A0A0P0VJW2;
DT 05-SEP-2012, integrated into UniProtKB/Swiss-Prot.
DT 16-AUG-2004, sequence version 1.
DT 03-AUG-2022, entry version 91.
DE RecName: Full=Probable sodium/metabolite cotransporter BASS4, chloroplastic;
DE AltName: Full=Bile acid-sodium symporter family protein 4;
DE Flags: Precursor;
GN Name=BASS4; OrderedLocusNames=Os02g0531200, LOC_Os02g32930;
GN ORFNames=OsJ_06999, P0605D08.11;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
CC -!- FUNCTION: May function as sodium-coupled metabolite transporter across
CC the chloroplast envelope. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Multi-pass membrane
CC protein {ECO:0000305}. Plastid, chloroplast envelope {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the bile acid:sodium symporter (BASS) (TC
CC 2.A.28) family. {ECO:0000305}.
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DR EMBL; AP005110; BAD28409.1; -; Genomic_DNA.
DR EMBL; AP008208; BAF08937.1; -; Genomic_DNA.
DR EMBL; AP014958; BAS79034.1; -; Genomic_DNA.
DR EMBL; CM000139; EEE57120.1; -; Genomic_DNA.
DR RefSeq; XP_015623372.1; XM_015767886.1.
DR AlphaFoldDB; Q6ESG1; -.
DR SMR; Q6ESG1; -.
DR STRING; 4530.OS02T0531200-01; -.
DR PaxDb; Q6ESG1; -.
DR PRIDE; Q6ESG1; -.
DR EnsemblPlants; Os02t0531200-01; Os02t0531200-01; Os02g0531200.
DR GeneID; 4329548; -.
DR Gramene; Os02t0531200-01; Os02t0531200-01; Os02g0531200.
DR KEGG; osa:4329548; -.
DR eggNOG; KOG4821; Eukaryota.
DR HOGENOM; CLU_033952_0_1_1; -.
DR InParanoid; Q6ESG1; -.
DR OMA; FFFYGLK; -.
DR OrthoDB; 949808at2759; -.
DR Proteomes; UP000000763; Chromosome 2.
DR Proteomes; UP000007752; Chromosome 2.
DR Proteomes; UP000059680; Chromosome 2.
DR Genevisible; Q6ESG1; OS.
DR GO; GO:0009941; C:chloroplast envelope; IEA:UniProtKB-SubCell.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR Gene3D; 1.20.1530.20; -; 1.
DR InterPro; IPR038770; Na+/solute_symporter_sf.
DR InterPro; IPR016833; Put_Na-Bile_cotransptr.
DR PANTHER; PTHR18640; PTHR18640; 1.
DR Pfam; PF13593; SBF_like; 1.
PE 3: Inferred from homology;
KW Chloroplast; Membrane; Plastid; Reference proteome; Transit peptide;
KW Transmembrane; Transmembrane helix; Transport.
FT TRANSIT 1..55
FT /note="Chloroplast"
FT /evidence="ECO:0000255"
FT CHAIN 56..423
FT /note="Probable sodium/metabolite cotransporter BASS4,
FT chloroplastic"
FT /id="PRO_0000418611"
FT TRANSMEM 96..116
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 123..140
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 153..173
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 182..202
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 212..232
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 244..264
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 284..301
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 315..335
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 389..409
FT /note="Helical"
FT /evidence="ECO:0000255"
FT REGION 23..45
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 423 AA; 44483 MW; 70ACCE2031C00B8D CRC64;
MVTTHHLCLL RSTVLSVPVR LRAPRAPPHP RLPTASASAS SYHGPTHLRR LRPLRAAAAA
AGGASPDGAD GAKRPAPAAA SSSLGAALVG FARSNFLPLA LIAGIALALM DPTLGCLAHK
YSLSKYSTFG IFLISGLTLR TKELGAALEA WPAGLFGLAS ILLFTPFLAQ FIMQIKFFPH
EFITGLAMFC CMPTTLSSGV TLTQLVGGNT ALALAMTAIS NLLGIMIVPL SLAKYIGVGA
GVSLPTEKLF KSLVTTLLIP IILGKVARET SKGIAGFVDG NKQGFSVTSA ILLSLVPWIQ
VSRSRSLLLS VQPKAFAVAV TVGVLLHFAL LAFNAAALHI LSRLEQRGVS VFARNEYARA
VILVASQKTL PVLVAVVEQL GGALGESGLL VIPCVAAHIN QIIIDSIIVN WWRQRDQQFA
NAK
