BATF3_RAT
ID BATF3_RAT Reviewed; 133 AA.
AC P97876;
DT 18-MAR-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-1997, sequence version 1.
DT 25-MAY-2022, entry version 124.
DE RecName: Full=Basic leucine zipper transcriptional factor ATF-like 3;
DE Short=B-ATF-3;
DE AltName: Full=Jun dimerization protein 1;
DE Short=JDP-1;
GN Name=Batf3; Synonyms=Jdp1;
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Rattus.
OX NCBI_TaxID=10116;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], TISSUE SPECIFICITY, AND INTERACTION WITH
RP JUN.
RX PubMed=9154808; DOI=10.1128/mcb.17.6.3094;
RA Aronheim A., Zandi E., Hennemann H., Elledge S.J., Karin M.;
RT "Isolation of an AP-1 repressor by a novel method for detecting protein-
RT protein interactions.";
RL Mol. Cell. Biol. 17:3094-3102(1997).
CC -!- FUNCTION: AP-1 family transcription factor that controls the
CC differentiation of CD8(+) thymic conventional dendritic cells in the
CC immune system. Acts via the formation of a heterodimer with JUN family
CC proteins that recognizes and binds DNA sequence 5'-TGA[CG]TCA-3' and
CC regulates expression of target genes. Required for development of CD8-
CC alpha(+) classical dendritic cells (cDCs) and related CD103(+)
CC dendritic cells that cross-present antigens to CD8 T-cells and produce
CC interleukin-12 (IL12) in response to pathogens (By similarity).
CC {ECO:0000250}.
CC -!- SUBUNIT: Heterodimer; heterodimerizes with JUN family proteins.
CC Interacts with JUN. {ECO:0000269|PubMed:9154808}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00978}.
CC -!- TISSUE SPECIFICITY: Ubiquitously expressed.
CC {ECO:0000269|PubMed:9154808}.
CC -!- SIMILARITY: Belongs to the bZIP family. {ECO:0000305}.
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DR EMBL; U53450; AAB49921.1; -; Genomic_DNA.
DR RefSeq; NP_068637.1; NM_021865.1.
DR AlphaFoldDB; P97876; -.
DR SMR; P97876; -.
DR BioGRID; 248847; 1.
DR STRING; 10116.ENSRNOP00000004962; -.
DR PaxDb; P97876; -.
DR GeneID; 60462; -.
DR KEGG; rno:60462; -.
DR CTD; 55509; -.
DR RGD; 620501; Batf3.
DR eggNOG; KOG1414; Eukaryota.
DR InParanoid; P97876; -.
DR OrthoDB; 1440552at2759; -.
DR PhylomeDB; P97876; -.
DR PRO; PR:P97876; -.
DR Proteomes; UP000002494; Unplaced.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0090575; C:RNA polymerase II transcription regulator complex; ISO:RGD.
DR GO; GO:0003677; F:DNA binding; TAS:RGD.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IBA:GO_Central.
DR GO; GO:0001227; F:DNA-binding transcription repressor activity, RNA polymerase II-specific; ISO:RGD.
DR GO; GO:0044877; F:protein-containing complex binding; TAS:RGD.
DR GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; ISO:RGD.
DR GO; GO:1990837; F:sequence-specific double-stranded DNA binding; ISO:RGD.
DR GO; GO:0097028; P:dendritic cell differentiation; ISS:UniProtKB.
DR GO; GO:0043011; P:myeloid dendritic cell differentiation; ISS:UniProtKB.
DR GO; GO:0000122; P:negative regulation of transcription by RNA polymerase II; ISO:RGD.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR GO; GO:0009615; P:response to virus; ISS:UniProtKB.
DR InterPro; IPR000837; AP-1.
DR InterPro; IPR004827; bZIP.
DR InterPro; IPR046347; bZIP_sf.
DR InterPro; IPR029818; p21SNFT.
DR PANTHER; PTHR23351; PTHR23351; 1.
DR PANTHER; PTHR23351:SF13; PTHR23351:SF13; 1.
DR Pfam; PF07716; bZIP_2; 1.
DR PRINTS; PR00042; LEUZIPPRFOS.
DR SMART; SM00338; BRLZ; 1.
DR SUPFAM; SSF57959; SSF57959; 1.
DR PROSITE; PS50217; BZIP; 1.
DR PROSITE; PS00036; BZIP_BASIC; 1.
PE 1: Evidence at protein level;
KW Activator; DNA-binding; Nucleus; Phosphoprotein; Reference proteome;
KW Repressor; Transcription; Transcription regulation.
FT CHAIN 1..133
FT /note="Basic leucine zipper transcriptional factor ATF-like
FT 3"
FT /id="PRO_0000326108"
FT DOMAIN 28..91
FT /note="bZIP"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00978"
FT REGION 1..68
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 30..55
FT /note="Basic motif"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00978"
FT REGION 56..84
FT /note="Leucine-zipper"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00978"
FT COMPBIAS 1..21
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 47..68
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOD_RES 2
FT /note="Phosphoserine"
FT /evidence="ECO:0000250|UniProtKB:Q9NR55"
FT MOD_RES 24
FT /note="Phosphoserine"
FT /evidence="ECO:0000250|UniProtKB:Q9NR55"
SQ SEQUENCE 133 AA; 15129 MW; 0A38C37121EB06F2 CRC64;
MSQGPPAGGV LQSSVAAPGN QPQSPKDDDR KVRRREKNRV AAQRSRKKQT QKSDKLHEEH
ESLEQENSVL RREIAKLKEE LRHLTEALKE HEKMCPLLLC PMNFVQLRPD PVASWSAHDA
PDHPSFIWLG TLV