RS8_METJA
ID RS8_METJA Reviewed; 130 AA.
AC P54041;
DT 01-OCT-1996, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-1996, sequence version 1.
DT 25-MAY-2022, entry version 118.
DE RecName: Full=30S ribosomal protein S8;
GN Name=rps8; OrderedLocusNames=MJ0470;
OS Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
OS 10045 / NBRC 100440) (Methanococcus jannaschii).
OC Archaea; Euryarchaeota; Methanomada group; Methanococci; Methanococcales;
OC Methanocaldococcaceae; Methanocaldococcus.
OX NCBI_TaxID=243232;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440;
RX PubMed=8688087; DOI=10.1126/science.273.5278.1058;
RA Bult C.J., White O., Olsen G.J., Zhou L., Fleischmann R.D., Sutton G.G.,
RA Blake J.A., FitzGerald L.M., Clayton R.A., Gocayne J.D., Kerlavage A.R.,
RA Dougherty B.A., Tomb J.-F., Adams M.D., Reich C.I., Overbeek R.,
RA Kirkness E.F., Weinstock K.G., Merrick J.M., Glodek A., Scott J.L.,
RA Geoghagen N.S.M., Weidman J.F., Fuhrmann J.L., Nguyen D., Utterback T.R.,
RA Kelley J.M., Peterson J.D., Sadow P.W., Hanna M.C., Cotton M.D.,
RA Roberts K.M., Hurst M.A., Kaine B.P., Borodovsky M., Klenk H.-P.,
RA Fraser C.M., Smith H.O., Woese C.R., Venter J.C.;
RT "Complete genome sequence of the methanogenic archaeon, Methanococcus
RT jannaschii.";
RL Science 273:1058-1073(1996).
RN [2]
RP X-RAY CRYSTALLOGRAPHY (2.6 ANGSTROMS).
RX PubMed=11478863; DOI=10.1006/jmbi.2001.4877;
RA Tishchenko S., Nikulin A., Fomenkova N., Nevskaya N., Nikonov O., Dumas P.,
RA Moine H., Ehresmann B., Ehresmann C., Piendl W., Lamzin V., Garber M.B.,
RA Nikonov S.;
RT "Detailed analysis of RNA-protein interactions within the ribosomal protein
RT S8-rRNA complex from the archaeon Methanococcus jannaschii.";
RL J. Mol. Biol. 311:311-324(2001).
CC -!- FUNCTION: One of the primary rRNA binding proteins, it binds directly
CC to 16S rRNA central domain where it helps coordinate assembly of the
CC platform of the 30S subunit. {ECO:0000250}.
CC -!- SUBUNIT: Part of the 30S ribosomal subunit.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uS8 family.
CC {ECO:0000305}.
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DR EMBL; L77117; AAB98459.1; -; Genomic_DNA.
DR PIR; F64358; F64358.
DR RefSeq; WP_010869971.1; NC_000909.1.
DR PDB; 1I6U; X-ray; 2.60 A; A/B=1-130.
DR PDBsum; 1I6U; -.
DR AlphaFoldDB; P54041; -.
DR SMR; P54041; -.
DR STRING; 243232.MJ_0470; -.
DR EnsemblBacteria; AAB98459; AAB98459; MJ_0470.
DR GeneID; 8805616; -.
DR KEGG; mja:MJ_0470; -.
DR eggNOG; arCOG04091; Archaea.
DR HOGENOM; CLU_098428_1_1_2; -.
DR InParanoid; P54041; -.
DR OMA; LPAKNFG; -.
DR OrthoDB; 91154at2157; -.
DR PhylomeDB; P54041; -.
DR EvolutionaryTrace; P54041; -.
DR Proteomes; UP000000805; Chromosome.
DR GO; GO:0022627; C:cytosolic small ribosomal subunit; IBA:GO_Central.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR HAMAP; MF_01302_A; Ribosomal_S8_A; 1.
DR InterPro; IPR000630; Ribosomal_S8.
DR InterPro; IPR035987; Ribosomal_S8_sf.
DR PANTHER; PTHR11758; PTHR11758; 1.
DR Pfam; PF00410; Ribosomal_S8; 1.
DR SUPFAM; SSF56047; SSF56047; 1.
DR PROSITE; PS00053; RIBOSOMAL_S8; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Reference proteome; Ribonucleoprotein; Ribosomal protein;
KW RNA-binding; rRNA-binding.
FT CHAIN 1..130
FT /note="30S ribosomal protein S8"
FT /id="PRO_0000126540"
FT HELIX 6..19
FT /evidence="ECO:0007829|PDB:1I6U"
FT STRAND 23..29
FT /evidence="ECO:0007829|PDB:1I6U"
FT HELIX 32..43
FT /evidence="ECO:0007829|PDB:1I6U"
FT STRAND 50..53
FT /evidence="ECO:0007829|PDB:1I6U"
FT STRAND 56..58
FT /evidence="ECO:0007829|PDB:1I6U"
FT STRAND 60..64
FT /evidence="ECO:0007829|PDB:1I6U"
FT STRAND 72..74
FT /evidence="ECO:0007829|PDB:1I6U"
FT HELIX 87..93
FT /evidence="ECO:0007829|PDB:1I6U"
FT STRAND 101..106
FT /evidence="ECO:0007829|PDB:1I6U"
FT STRAND 109..112
FT /evidence="ECO:0007829|PDB:1I6U"
FT HELIX 113..118
FT /evidence="ECO:0007829|PDB:1I6U"
FT STRAND 123..129
FT /evidence="ECO:0007829|PDB:1I6U"
SQ SEQUENCE 130 AA; 14625 MW; 759E14F6344ADBA5 CRC64;
MSLMDPLANA LNHISNCERV GKKVVYIKPA SKLIGRVLKV MQDNGYIGEF EFIEDGRAGI
FKVELIGKIN KCGAIKPRFP VKKFGYEKFE KRYLPARDFG ILIVSTTQGV MSHEEAKKRG
LGGRLLAYVY