RS8_MYCS2
ID RS8_MYCS2 Reviewed; 132 AA.
AC A0QSG3; I7G432;
DT 02-OCT-2007, integrated into UniProtKB/Swiss-Prot.
DT 09-JAN-2007, sequence version 1.
DT 25-MAY-2022, entry version 92.
DE RecName: Full=30S ribosomal protein S8 {ECO:0000255|HAMAP-Rule:MF_01302};
GN Name=rpsH {ECO:0000255|HAMAP-Rule:MF_01302};
GN OrderedLocusNames=MSMEG_1469, MSMEI_1433;
OS Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) (Mycobacterium
OS smegmatis).
OC Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
OC Mycolicibacterium.
OX NCBI_TaxID=246196;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700084 / mc(2)155;
RA Fleischmann R.D., Dodson R.J., Haft D.H., Merkel J.S., Nelson W.C.,
RA Fraser C.M.;
RL Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700084 / mc(2)155;
RX PubMed=17295914; DOI=10.1186/gb-2007-8-2-r20;
RA Deshayes C., Perrodou E., Gallien S., Euphrasie D., Schaeffer C.,
RA Van-Dorsselaer A., Poch O., Lecompte O., Reyrat J.-M.;
RT "Interrupted coding sequences in Mycobacterium smegmatis: authentic
RT mutations or sequencing errors?";
RL Genome Biol. 8:R20.1-R20.9(2007).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], IDENTIFICATION BY MASS
RP SPECTROMETRY [LARGE SCALE ANALYSIS], AND CLEAVAGE OF INITIATOR METHIONINE.
RC STRAIN=ATCC 700084 / mc(2)155;
RX PubMed=18955433; DOI=10.1101/gr.081901.108;
RA Gallien S., Perrodou E., Carapito C., Deshayes C., Reyrat J.-M.,
RA Van Dorsselaer A., Poch O., Schaeffer C., Lecompte O.;
RT "Ortho-proteogenomics: multiple proteomes investigation through orthology
RT and a new MS-based protocol.";
RL Genome Res. 19:128-135(2009).
CC -!- FUNCTION: One of the primary rRNA binding proteins, it binds directly
CC to 16S rRNA central domain where it helps coordinate assembly of the
CC platform of the 30S subunit. {ECO:0000255|HAMAP-Rule:MF_01302}.
CC -!- SUBUNIT: Part of the 30S ribosomal subunit. Contacts proteins S5 and
CC S12. {ECO:0000255|HAMAP-Rule:MF_01302}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uS8 family.
CC {ECO:0000255|HAMAP-Rule:MF_01302}.
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DR EMBL; CP000480; ABK75423.1; -; Genomic_DNA.
DR EMBL; CP001663; AFP37906.1; -; Genomic_DNA.
DR RefSeq; WP_003892856.1; NZ_SIJM01000016.1.
DR RefSeq; YP_885851.1; NC_008596.1.
DR PDB; 5O5J; EM; 3.45 A; H=1-132.
DR PDB; 5O61; EM; 3.31 A; BH=1-132.
DR PDB; 5XYU; EM; 3.45 A; H=1-132.
DR PDB; 5ZEB; EM; 3.40 A; h=1-132.
DR PDB; 5ZEP; EM; 3.40 A; h=1-132.
DR PDB; 5ZEU; EM; 3.70 A; h=1-132.
DR PDB; 6DZI; EM; 3.46 A; q=2-132.
DR PDB; 6DZK; EM; 3.60 A; H=2-132.
DR PDBsum; 5O5J; -.
DR PDBsum; 5O61; -.
DR PDBsum; 5XYU; -.
DR PDBsum; 5ZEB; -.
DR PDBsum; 5ZEP; -.
DR PDBsum; 5ZEU; -.
DR PDBsum; 6DZI; -.
DR PDBsum; 6DZK; -.
DR AlphaFoldDB; A0QSG3; -.
DR SMR; A0QSG3; -.
DR IntAct; A0QSG3; 2.
DR STRING; 246196.MSMEI_1433; -.
DR PRIDE; A0QSG3; -.
DR EnsemblBacteria; ABK75423; ABK75423; MSMEG_1469.
DR EnsemblBacteria; AFP37906; AFP37906; MSMEI_1433.
DR GeneID; 66732926; -.
DR KEGG; msg:MSMEI_1433; -.
DR KEGG; msm:MSMEG_1469; -.
DR PATRIC; fig|246196.19.peg.1454; -.
DR eggNOG; COG0096; Bacteria.
DR OMA; FDQGYIL; -.
DR OrthoDB; 1692188at2; -.
DR Proteomes; UP000000757; Chromosome.
DR Proteomes; UP000006158; Chromosome.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR HAMAP; MF_01302_B; Ribosomal_S8_B; 1.
DR InterPro; IPR000630; Ribosomal_S8.
DR InterPro; IPR035987; Ribosomal_S8_sf.
DR PANTHER; PTHR11758; PTHR11758; 1.
DR Pfam; PF00410; Ribosomal_S8; 1.
DR SUPFAM; SSF56047; SSF56047; 1.
DR PROSITE; PS00053; RIBOSOMAL_S8; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Reference proteome; Ribonucleoprotein; Ribosomal protein;
KW RNA-binding; rRNA-binding.
FT INIT_MET 1
FT /note="Removed"
FT /evidence="ECO:0000269|PubMed:18955433"
FT CHAIN 2..132
FT /note="30S ribosomal protein S8"
FT /id="PRO_0000305750"
FT HELIX 7..19
FT /evidence="ECO:0007829|PDB:5XYU"
FT STRAND 23..28
FT /evidence="ECO:0007829|PDB:5XYU"
FT HELIX 31..42
FT /evidence="ECO:0007829|PDB:5XYU"
FT STRAND 45..50
FT /evidence="ECO:0007829|PDB:5XYU"
FT STRAND 55..57
FT /evidence="ECO:0007829|PDB:5XYU"
FT STRAND 59..64
FT /evidence="ECO:0007829|PDB:5XYU"
FT STRAND 77..79
FT /evidence="ECO:0007829|PDB:5XYU"
FT STRAND 83..85
FT /evidence="ECO:0007829|PDB:5XYU"
FT STRAND 91..93
FT /evidence="ECO:0007829|PDB:5O5J"
FT STRAND 99..107
FT /evidence="ECO:0007829|PDB:5XYU"
FT STRAND 112..114
FT /evidence="ECO:0007829|PDB:5XYU"
FT HELIX 115..121
FT /evidence="ECO:0007829|PDB:5XYU"
FT STRAND 125..131
FT /evidence="ECO:0007829|PDB:5XYU"
SQ SEQUENCE 132 AA; 14471 MW; 465820E7F60B0E8D CRC64;
MTMTDPIADF LTRLRNANSA YHDEVTLPHS KLKANIAEIL KREGYISDYR TEDARVGKSL
VVQLKYGPSR ERSIAGLRRV SKPGLRVYAK STNLPRVLGG LGVAIISTSS GLLTDRQAAR
QGVGGEVLAY VW
