RS8_PYRAB
ID RS8_PYRAB Reviewed; 130 AA.
AC Q9V1V0; G8ZHW0;
DT 16-NOV-2001, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2000, sequence version 1.
DT 25-MAY-2022, entry version 109.
DE RecName: Full=30S ribosomal protein S8 {ECO:0000255|HAMAP-Rule:MF_01302};
GN Name=rps8 {ECO:0000255|HAMAP-Rule:MF_01302}; OrderedLocusNames=PYRAB03260;
GN ORFNames=PAB2131;
OS Pyrococcus abyssi (strain GE5 / Orsay).
OC Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae;
OC Pyrococcus.
OX NCBI_TaxID=272844;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=GE5 / Orsay;
RX PubMed=12622808; DOI=10.1046/j.1365-2958.2003.03381.x;
RA Cohen G.N., Barbe V., Flament D., Galperin M., Heilig R., Lecompte O.,
RA Poch O., Prieur D., Querellou J., Ripp R., Thierry J.-C., Van der Oost J.,
RA Weissenbach J., Zivanovic Y., Forterre P.;
RT "An integrated analysis of the genome of the hyperthermophilic archaeon
RT Pyrococcus abyssi.";
RL Mol. Microbiol. 47:1495-1512(2003).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=GE5 / Orsay;
RX PubMed=22057919; DOI=10.1007/s00284-011-0035-x;
RA Gao J., Wang J.;
RT "Re-annotation of two hyperthermophilic archaea Pyrococcus abyssi GE5 and
RT Pyrococcus furiosus DSM 3638.";
RL Curr. Microbiol. 64:118-129(2012).
CC -!- FUNCTION: One of the primary rRNA binding proteins, it binds directly
CC to 16S rRNA central domain where it helps coordinate assembly of the
CC platform of the 30S subunit. {ECO:0000255|HAMAP-Rule:MF_01302}.
CC -!- SUBUNIT: Part of the 30S ribosomal subunit. {ECO:0000255|HAMAP-
CC Rule:MF_01302}.
CC -!- SIMILARITY: Belongs to the universal ribosomal protein uS8 family.
CC {ECO:0000255|HAMAP-Rule:MF_01302}.
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DR EMBL; AJ248284; CAB49248.1; -; Genomic_DNA.
DR EMBL; HE613800; CCE69703.1; -; Genomic_DNA.
DR PIR; A75146; A75146.
DR RefSeq; WP_010867448.1; NC_000868.1.
DR PDB; 6SW9; EM; 4.20 A; I=1-130.
DR PDB; 6SWC; EM; 3.30 A; I=1-130.
DR PDB; 6SWD; EM; 3.20 A; I=1-130.
DR PDBsum; 6SW9; -.
DR PDBsum; 6SWC; -.
DR PDBsum; 6SWD; -.
DR AlphaFoldDB; Q9V1V0; -.
DR SMR; Q9V1V0; -.
DR STRING; 272844.PAB2131; -.
DR EnsemblBacteria; CAB49248; CAB49248; PAB2131.
DR GeneID; 1495216; -.
DR KEGG; pab:PAB2131; -.
DR PATRIC; fig|272844.11.peg.347; -.
DR eggNOG; arCOG04091; Archaea.
DR HOGENOM; CLU_098428_1_1_2; -.
DR OMA; LPAKNFG; -.
DR OrthoDB; 91154at2157; -.
DR PhylomeDB; Q9V1V0; -.
DR Proteomes; UP000000810; Chromosome.
DR Proteomes; UP000009139; Chromosome.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0019843; F:rRNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-UniRule.
DR HAMAP; MF_01302_A; Ribosomal_S8_A; 1.
DR InterPro; IPR000630; Ribosomal_S8.
DR InterPro; IPR035987; Ribosomal_S8_sf.
DR PANTHER; PTHR11758; PTHR11758; 1.
DR Pfam; PF00410; Ribosomal_S8; 1.
DR SUPFAM; SSF56047; SSF56047; 1.
DR PROSITE; PS00053; RIBOSOMAL_S8; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Ribonucleoprotein; Ribosomal protein; RNA-binding;
KW rRNA-binding.
FT CHAIN 1..130
FT /note="30S ribosomal protein S8"
FT /id="PRO_0000126547"
FT HELIX 6..17
FT /evidence="ECO:0007829|PDB:6SWD"
FT TURN 18..21
FT /evidence="ECO:0007829|PDB:6SWD"
FT STRAND 23..27
FT /evidence="ECO:0007829|PDB:6SWD"
FT HELIX 33..43
FT /evidence="ECO:0007829|PDB:6SWD"
FT STRAND 46..53
FT /evidence="ECO:0007829|PDB:6SWD"
FT STRAND 56..58
FT /evidence="ECO:0007829|PDB:6SWD"
FT STRAND 60..65
FT /evidence="ECO:0007829|PDB:6SWD"
FT STRAND 70..74
FT /evidence="ECO:0007829|PDB:6SWD"
FT HELIX 87..93
FT /evidence="ECO:0007829|PDB:6SWD"
FT STRAND 94..96
FT /evidence="ECO:0007829|PDB:6SWD"
FT STRAND 100..106
FT /evidence="ECO:0007829|PDB:6SWD"
FT STRAND 109..112
FT /evidence="ECO:0007829|PDB:6SWD"
FT HELIX 113..119
FT /evidence="ECO:0007829|PDB:6SWD"
FT STRAND 123..130
FT /evidence="ECO:0007829|PDB:6SWD"
SQ SEQUENCE 130 AA; 14748 MW; A1A0477188C59F85 CRC64;
MTLLDPLANA LSHITNSERV GKREVYIKPA SKLIGEVLRV MQKYGYIGEF EFIDDGRAGV
YRVQLLGKIN KAGAIKPRFP VKARDYERWE KRFLPAFEFG ILIVSTSQGV MSHKEAREKG
IGGRLIAYVY
